RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 PhyhO35386 338 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 AF067061O70616 171 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Crabp1P62965 137 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Elavl1P70372 326 aaKnown RBP8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Rspo3Q2TJ95 277 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Shisa3Q3UPR0 238 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tbccd1Q640P7 552 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 2810021J22RikQ8BIB6 539 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm13199Q8C8E0 125 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Dusp22Q99N11 184 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ethe1Q9DCM0 254 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ubl3Q9Z2M6 117 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Sirpb1bA0A0A6YXN8 397 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 4930563M21RikA0A1L1SUT5 578 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm8225D3Z536 292 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 5830473C10RikF8VQ07 620 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Vmn2r82G3UWA2 865 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Sirpb1cK7N6K7 397 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cd1d1P11609 336 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cd1d2P11610 336 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Il9P15247 144 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Mep1aP28825 747 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Rpl27P61358 136 aaKnown RBP8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ces2fQ08ED5 561 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Pla2g7Q60963 440 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 ArhgdigQ62160 225 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cfap161Q6P8Y0 303 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1477Q7TQQ7 315 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1126Q7TR49 314 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr285Q7TS17 319 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 PurgQ8R4E6 350 aaKnown RBP8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr95Q8VFE2 312 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Emc3Q99KI3 261 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 2210010C04RikQ9CPN9 247 aaKnown RBP8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 S100a16Q9D708 124 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Bbs10Q9DBI2 713 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ak3Q9WTP7 227 aa8.78□□□□□ -1
Pcdh1-201ENSMUST00000057185 Pom121l12A0A1B0GSJ4 278 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm13762A2ATG2 311 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Dpy19l1A6X919 746 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Mettl11bB2RXM4 283 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm3543D3Z235 184 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Macc1E9PXX8 851 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr370E9Q848 314 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tspan15F7BWT7 294 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ppt2O35448 302 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 EomesO54839 707 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Slc6a18O88576 615 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cxcl5P50228 132 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 AgrpP56473 131 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gabrr1P56475 480 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Casp3P70677 277 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 B4galnt1Q09200 533 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 KcnrgQ2TUM3 264 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Zfp36l3Q5ISE2 725 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Fstl4Q5STE3 841 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Cbx5Q61686 191 aaKnown RBP8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tmeff1Q6PFE7 372 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Prss43Q76HL1 382 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Plekhm1Q7TSI1 1074 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Krt33aQ8K0Y2 404 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Vmn1r231Q8R2A3 311 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tmem242Q8VCR3 140 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Alg12Q8VDB2 486 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Rab7bQ8VEA8 199 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1459Q8VFV9 307 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr283Q8VGU2 309 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tomm40lQ9CZR3 308 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Snu13Q9D0T1 128 aaKnown RBP8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 OxsmQ9D404 459 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr930Q9EQ99 308 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 P2rx4Q9JJX6 388 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Reep6Q9JM62 201 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Dusp13Q9QYJ7 198 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Psma1Q9R1P4 263 aa8.77□□□□□ -1
Pcdh1-201ENSMUST00000057185 Col5a3Q9JLI2 1739 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Aadacl3A2A7Z8 408 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Tmsb15aA2AEH9 79 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 5430403G16RikD3Z5L4 667 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r120K7N6J6 305 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Cpt2P52825 658 aaKnown RBP8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Galr1P56479 348 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Epha4Q03137 986 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Pgap1Q3UUQ7 922 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Lhfpl5Q4KL25 219 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Csnk2a1Q60737 391 aaKnown RBP8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Zfp933Q6PEE4 468 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 S100a15aQ6S5I3 108 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Calm5Q6W3E0 140 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Cpeb3Q7TN99 716 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr967Q7TRA6 310 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Fmr1nbQ80ZA7 238 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Stk35Q80ZW0 539 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Nhlrc2Q8BZW8 725 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 ApehQ8R146 732 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Ubac2Q8R1K1 345 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr777Q8VFH3 311 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Ubl7Q91W67 380 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Ackr4Q924I3 350 aa8.77□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Sytl3Q99N48 607 aa8.77□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms