RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rce1P57791 329 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nme2Q01768 152 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm6760Q0ZNK3 87 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Spock1Q62288 442 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Dtx4Q6PDK8 616 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1148Q7TR35 314 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr198Q7TS40 306 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cggbp1Q8BHG9 167 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm5662Q8BX20 144 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ikzf4Q8C208 586 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zim1Q8C393 579 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cd209dQ91ZW8 237 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rnf141Q99MB7 230 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Arpc5Q9CPW4 151 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Msmo1Q9CRA4 293 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Q9CRW3 126 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Exosc8Q9D753 276 aaKnown RBP9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Aph1cQ9DCZ9 258 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ms4a4bQ9ES61 226 aa9.37□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm17655A0A1B0GT13 591 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm438B1ASB3 393 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm3072F6SKY8 209 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm17654F7AXR3 209 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gpr83P30731 423 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 St8sia1Q64687 355 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Usf2Q64705 346 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cpeb4Q7TN98 729 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr804Q7TRH7 314 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Map6Q7TSJ2 906 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Atg4dQ8BGV9 474 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Flywch1Q8CI03 673 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slc25a42Q8R0Y8 318 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1143Q8VEU8 314 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1100Q8VFM1 321 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1377Q8VGH1 307 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Dusp22Q99N11 184 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cisd2Q9CQB5 135 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Arpc5lQ9D898 153 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr944Q9EQ91 311 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 St6galnac5Q9QYJ1 336 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Bex3Q9WTZ9 124 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn2r80E9Q1L0 863 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gls2Q571F8 602 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mef2aQ60929 498 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Ffar1Q76JU9 300 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Plekhm1Q7TSI1 1074 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm13199Q8C8E0 125 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 SinhcafQ8C8M1 221 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rtn4rl1Q8K0S5 445 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn1r19Q8R2C7 308 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cd177Q8R2S8 817 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lmcd1Q8VEE1 365 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mrgpra6Q91ZC6 301 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Glo1Q9CPU0 184 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 HpgdsQ9JHF7 199 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr455A0A0B4J1M2 317 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm15737D3YZR0 106 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr173E9QAT7 321 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sh2d1bO35324 132 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Htr5aP30966 357 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmprss9P69525 1065 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tmem217Q14AF1 189 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rhox4fQ2MDF8 205 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rhox4cQ2MDG1 205 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn1r11Q3SXA2 299 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Il10rbQ61190 349 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Adam12Q61824 903 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mc2rQ64326 296 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Slc22a13Q6A4L0 551 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cyb561a3Q6P1H1 242 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 MffQ6PCP5 291 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr782Q7TRI2 314 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr305Q7TS02 319 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 RinlQ80UW3 563 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nmnat2Q8BNJ3 307 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cmtm4Q8CJ61 208 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Vmn1r226Q8R2A8 298 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr1110Q8VG38 312 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Rhox4aQ9D3I8 205 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cacna1dQ99246 2179 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tspan15F7BWT7 294 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sp100O35892 482 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Crisp2P16563 243 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 MatkP41242 505 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Tacr3P47937 452 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Nat2P50295 290 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 CluQ06890 448 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Mccc2Q3ULD5 563 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Sema6dQ76KF0 1073 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cuedc1Q8R3V6 388 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr446Q8VEV0 308 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Glipr2Q9CYL5 154 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Olfr957Q9EQB7 311 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Cts8Q9JI81 333 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Lancl2Q9JJK2 450 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Pla2g2fQ9QZT4 168 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Spint2Q9WU03 252 aa9.36□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Zfp616J3QN14 987 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 Gm5039J3QNT6 144 aa9.35□□□□□ -0.91
Ccdc40-201ENSMUST00000035935 RaxO35602 342 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms