RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Dnttip1Q99LB0 328 aa16.47■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Sytl3Q99N48 607 aa16.47■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Cnih4Q9CX13 139 aa16.47■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Bbs10Q9DBI2 713 aa16.47■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Mrps15Q9DC71 258 aaKnown RBP16.47■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Stard10Q9JMD3 291 aa16.47■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Gm10428J3QNV7 132 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Map2k6P70236 334 aaKnown RBP16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Ceacam19Q3TQ88 271 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Lsm11Q8BUV6 361 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Vmn1r28Q8R2C9 302 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 MetrnlQ8VE43 311 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Med29Q9DB91 199 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Nqo2Q9JI75 231 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Pcsk5Q04592 1877 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Sirpb1bA0A0A6YXN8 397 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Dpy19l1A6X919 746 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Sirpb1cK7N6K7 397 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Vmn2r51L7N215 852 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Zfp977L7N2E7 438 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Fgf14P70379 247 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Olfr18Q0VAX9 331 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Ptpmt1Q66GT5 193 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Olfr479Q7TRV1 327 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Apoa5Q8C7G5 368 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Iglon5Q8HW98 336 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Mitd1Q8VDV8 249 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 SelenosQ9BCZ4 190 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Elovl7Q9D2Y9 281 aa16.46■□□□□ 0.23
Ccdc3-201ENSMUST00000027988 Gm15821A6X8J8 139 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Gm20390E9PZF0 267 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Vmn2r80E9Q1L0 863 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Syt3O35681 587 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Slc2a1P17809 492 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Nme2Q01768 152 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Tie1Q06806 1134 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Cacul1Q8R0X2 377 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr1277Q8VF41 303 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Slc27a4Q91VE0 643 aaKnown RBP16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Ubl3Q9Z2M6 117 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Gm5788A0A1Y7VK80 144 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 6330409D20RikA2AK85 162 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Cdh19E9Q3A7 770 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Gm6803J3QPI8 144 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Cxcl2P10889 100 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Hmga2P52927 108 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Taar8cQ5QD05 344 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Fkbp10Q61576 581 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Inca1Q6PKN7 231 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Phf21aQ6ZPK0 659 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Ap1s3Q7TN05 154 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Negr1Q80Z24 348 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Rab7bQ8VEA8 199 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr1501Q8VFQ3 315 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr410Q8VFX7 315 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr402Q8VFX8 315 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Htra3Q9D236 459 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Il36aQ9JLA2 160 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Foxo1Q9R1E0 652 aa16.45■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Gm2022A0A1Y7VLT7 144 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Gm3543D3Z235 184 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Zp3P10761 424 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Sox18P43680 377 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr140Q60878 302 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Trim69Q80X56 500 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Tmem127Q8BGP5 238 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Eif1axQ8BMJ3 144 aaKnown RBP16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Aimp2Q8R010 320 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Abhd6Q8R2Y0 336 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr291Q8VF60 317 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Mrgpra4Q91WW2 313 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Ear6Q923L7 155 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Emc6Q9CQW0 110 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Xrcc2Q9CX47 278 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Arl6ip1Q9JKW0 203 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Sdk2Q6V4S5 2176 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Gm28897A0A087WP44 222 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Mtg2A2AFK4 405 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Wisp3D3Z5L9 354 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Ear3O35290 156 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 MosP00536 390 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Igkv7-33P01632 114 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Elavl1P70372 326 aaKnown RBP16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 ElocP83940 112 aaKnown RBP16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Nxt2Q3UNA4 142 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Ctf1Q60753 203 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Traf4Q61382 470 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Fam122bQ6NZE7 255 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr1135Q7TR42 310 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr527Q7TRT9 305 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Sec22aQ8BH47 307 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Med25Q8VCB2 745 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Olfr922Q8VG50 311 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 MallQ91X49 154 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Edem1Q925U4 652 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 PccbQ99MN9 541 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 ClnkQ9QZE2 435 aa16.44■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Ceacam16E9QA28 426 aa16.43■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 Gm3727J3QM54 205 aa16.43■□□□□ 0.22
Ccdc3-201ENSMUST00000027988 CfdP03953 259 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms