RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PCMT1P22061 227 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 GPR12P47775 334 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 DHODHQ02127 395 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 SHBQ15464 509 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 FER1L6-AS2Q96M78 137 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 SLC25A6P12236 298 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 FABP9Q0Z7S8 132 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 HLXQ14774 488 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-213ENST00000638680 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 ARL2-SNX15V9GYD0 113 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 SELEP16581 610 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 SUB1P53999 127 aaKnown RBP eCLIP16.7■□□□□ 0.263e-7■■■□□ 19
SCARB2-213ENST00000638680 TMEM178AQ8NBL3 297 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-213ENST00000638680 NUDT9Q9BW91 350 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 CHEK1O14757 476 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 MBP02144 154 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 RAC1P63000 192 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 MORN4Q8NDC4 146 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 GPR119Q8TDV5 335 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 C8orf44Q96CB5 159 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 DLL4Q9NR61 685 aa16.7■□□□□ 0.26
SCARB2-213ENST00000638680 LINC01553A4QN01 128 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 SEC14L6B5MCN3 397 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 H0YIG0 161 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 NDUFB7P17568 137 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 COX5AP20674 150 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 HES1Q14469 280 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 EDAQ92838 391 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 CMBLQ96DG6 245 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 TOLLIPQ9H0E2 274 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 IL20Q9NYY1 176 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 LAMP3Q9UQV4 416 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 RRADP55042 308 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 SUMO1P63165 101 aaKnown RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 CDONQ4KMG0 1287 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 Q6ZNB5 142 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 CDC20BQ86Y33 519 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 GPR32P1Q8NGA4 272 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 HGDQ93099 445 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 LINC00615Q96LM1 132 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 IFT22Q9H7X7 185 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 ST3GAL6Q9Y274 331 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 POLDIP2Q9Y2S7 368 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 AKAP11Q9UKA4 1901 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 A0A096LPE4 126 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 A0A1W2PPZ6 126 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 ZNF320A2RRD8 509 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 WNT3P56703 355 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 MLF2Q15773 248 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 CCDC74AQ96AQ1 378 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 LRRC30A6NM36 301 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 PHOX2AO14813 284 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 SPRY1O43609 319 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 CNIH1O95406 144 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 CLEC3BP05452 202 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 PCBP4P57723 403 aaKnown RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 PMP22Q01453 160 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 CMTM3Q96MX0 182 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 GINS3Q9BRX5 216 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 PEX11BO96011 259 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 AGFG1P52594 562 aaKnown RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 PCBP3P57721 371 aaKnown RBP16.69■□□□□ 0.26
SCARB2-213ENST00000638680 PNLIPRP3Q17RR3 467 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 TIGITQ495A1 244 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 MICAL3Q7RTP6 2002 aa16.69■□□□□ 0.26
SCARB2-213ENST00000638680 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 VPS25Q9BRG1 176 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 LRP12Q9Y561 859 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 hCG_1809904A0A1W2PP81 198 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 A0A1W2PPE2 198 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 A0A1W2PR64 198 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 A0A1W2PRV1 198 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 FRG2CA6NGY1 282 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 ABCD4O14678 606 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 SLC31A2O15432 143 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 RBPJQ06330 500 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 TAS2R45P59539 299 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 PPP2CBP62714 309 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 PPP2CAP67775 309 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 OR2W3Q7Z3T1 314 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 CISD2Q8N5K1 135 aaKnown RBP16.68■□□□□ 0.26
SCARB2-213ENST00000638680 OR52N4Q8NGI2 321 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 SEMG1P04279 462 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 GSG1Q2KHT4 349 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 MIDNQ504T8 468 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 SLC38A6Q8IZM9 456 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 TMEM104Q8NE00 496 aa16.68■□□□□ 0.26
SCARB2-213ENST00000638680 CDAP32320 146 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 HAAOP46952 286 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 GNB1P62873 340 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 OSR2Q8N2R0 312 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 SLC24A4Q8NFF2 622 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 GNB4Q9HAV0 340 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 CRLF2Q9HC73 371 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 MMP26Q9NRE1 261 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 SIT1Q9Y3P8 196 aa16.67■□□□□ 0.26
SCARB2-213ENST00000638680 YKT6O15498 198 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms