RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 NOC3LQ8WTT2 800 aaKnown RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CEMIPQ8WUJ3 1361 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 TRUB1Q8WWH5 349 aaKnown RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CASKIN1Q8WXD9 1431 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 PHF3Q92576 2039 aaKnown RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 FAM162AQ96A26 154 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 C3orf49Q96BT1 292 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 YIPF6Q96EC8 236 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 SAAL1Q96ER3 474 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CAPNS2Q96L46 248 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 SFXN2Q96NB2 322 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CCM2Q9BSQ5 444 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 ALKBH7Q9BT30 221 aaPredicted RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 DOHHQ9BU89 302 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 NUDT9Q9BW91 350 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 GNB1LQ9BYB4 327 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 SLC2A11Q9BYW1 496 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 RHOBTB2Q9BYZ6 727 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 PUS7LQ9H0K6 701 aaKnown RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 GABARAPL1Q9H0R8 117 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 SNX25Q9H3E2 840 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 ZDHHC6Q9H6R6 413 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 FN3KRPQ9HA64 309 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 MAGEF1Q9HAY2 307 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 XAB2Q9HCS7 855 aaKnown RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 YAE1D1Q9NRH1 226 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 METTL5Q9NRN9 209 aaKnown RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 SMC4Q9NTJ3 1288 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 ACER3Q9NUN7 267 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 TMOD2Q9NZR1 351 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CNIH4Q9P003 139 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CNOT8Q9UFF9 292 aaKnown RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 SERPINA10Q9UK55 444 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CES1P1Q9UKY3 287 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 CFAP45Q9UL16 551 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 TNFSF18Q9UNG2 199 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 C19orf53Q9UNZ5 99 aaPredicted RBP-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 FLVCR2Q9UPI3 526 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 MFHAS1Q9Y4C4 1052 aa-1.53□□□□□ -2.65
CDKL5-210ENST00000636046 EP400Q96L91 3159 aa-1.53□□□□□ -2.66
CDKL5-210ENST00000636046 MYO18AQ92614 2054 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 LCTP09848 1927 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 BRCA1P38398 1863 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 RALGAPA2Q2PPJ7 1873 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 MAST2Q6P0Q8 1798 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 COL4A6Q14031 1691 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 SCAF11Q99590 1463 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 A0A087WUU8 490 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 TRAV24A0A0B4J272 114 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 C11orf86A6NJI1 115 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 HMSDA8MTL9 139 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 KRBOX1C9JBD0 128 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 NDUFC2-KCTD14E9PQ53 114 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 RNASEK-C17orf49H0YIS7 233 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 H7C2G1 150 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 K7ERS5 55 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 DDX39AO00148 427 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 BCKDKO14874 412 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 ANP32CO43423 234 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 GNRH2O43555 120 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 TSPAN2O60636 221 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 UGT2B11O75310 529 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 SLC25A12O75746 678 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 ATP6AP2O75787 350 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 SHBGP04278 402 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 GAPDHP04406 335 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 H2BFMP0C1H6 154 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 UBBP0CG47 229 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 PTHLHP12272 177 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 FGFR2P21802 821 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 SPRR1BP22528 89 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 PRKACBP22694 351 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 PRTN3P24158 256 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 PSMB4P28070 264 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 PRDX2P32119 198 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 PSMB10P40306 273 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 FRKP42685 505 aaPredicted RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 QARSP47897 775 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 AQP4P55087 323 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 PKNOX1P55347 436 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 SYNJ2BPP57105 145 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 CNBPP62633 177 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 UBE2IP63279 158 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 TNFAIP6P98066 277 aaPredicted RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 TFAP4Q01664 338 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 HSF2Q03933 536 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 IFFO1Q0D2I5 559 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 NEXNQ0ZGT2 675 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 CDH17Q12864 832 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 NPTX1Q15818 432 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 GABRA6Q16445 453 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 DEFB110Q30KQ9 67 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 ZNF404Q494X3 552 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 FAM229BQ4G0N7 80 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 C2orf27AQ580R0 203 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 HSP90B2PQ58FF3 399 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 TCHHL1Q5QJ38 904 aaPredicted RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 RBM48Q5RL73 367 aaKnown RBP-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 CCNJQ5T5M9 372 aa-1.54□□□□□ -2.66
CDKL5-210ENST00000636046 DDI2Q5TDH0 399 aa-1.54□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms