RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 NDNFQ8TB73 568 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 OR51E1Q8TCB6 317 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 SGK3Q96BR1 496 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 LRRC46Q96FV0 321 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 OR14A2Q96R54 314 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 DCUN1D5Q9BTE7 237 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 ACTR6Q9GZN1 396 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 CDH20Q9HBT6 801 aa11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 MOV10Q9HCE1 1003 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-209ENST00000595803 CASKO14936 926 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 SC5DO75845 299 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 CD2P06729 351 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 CCL2P13500 99 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 CALRP27797 417 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 MAGEB1P43366 347 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 ASCL1P50553 236 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 GFOD2Q3B7J2 385 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 HSD17B12Q53GQ0 312 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 DOK3Q7L591 496 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF584Q8IVC4 421 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 CCDC54Q8NEL0 328 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 OR13C3Q8NGS6 347 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 OR10AC1Q8NH08 325 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 LILRB4Q8NHJ6 448 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 RGP1Q92546 391 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF75AQ96N20 296 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 C1QTNF5Q9BXJ0 243 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 OR10A4Q9H209 315 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 NOX4Q9NPH5 578 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 GPR84Q9NQS5 396 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 SNTG1Q9NSN8 517 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF319Q9P2F9 582 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 SLC25A15Q9Y619 301 aa11.32□□□□□ -0.6
SHKBP1-209ENST00000595803 A0A0U1RQV5 110 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 A0A1B0GTI1 187 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 LOC107986453A0A1B0GWG9 222 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 TRIM64BA6NI03 449 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 MTRF1O75570 445 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 IL1AP01583 271 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 RAF1P04049 648 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 UCHL1P09936 223 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF182P17025 639 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 SDC2P34741 201 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 RPS19P39019 145 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 MTNR1BP49286 362 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 MXD1Q05195 221 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 MALLQ13021 153 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 PPA1Q15181 289 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 DGUOKQ16854 277 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 SNAI3Q3KNW1 292 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 ALKBH2Q6NS38 261 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 TPRA1Q86W33 373 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 FAM169BQ8N8A8 192 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 OR5L1Q8NGL2 311 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 AKAP1Q92667 903 aaKnown RBP eCLIP11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 APOBEC3DQ96AK3 386 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 CCDC120Q96HB5 630 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 FAM71F1Q96KD3 344 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 DERL3Q96Q80 235 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 MED18Q9BUE0 208 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 RGCCQ9H4X1 137 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 TCF7L1Q9HCS4 588 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
SHKBP1-209ENST00000595803 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 TRAV1-2A0A0B4J238 106 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 C5orf63A6NC05 138 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 PDCD5O14737 125 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 PIN1P1O15428 100 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 XRCC2O43543 280 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 IGKV3-15P01624 115 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 CELA3BP08861 270 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 SRMP19623 302 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 SOX6P35712 828 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 RORCP51449 518 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF83P51522 516 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 HGFACQ04756 655 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 TAB1Q15750 504 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 FAM27D1Q5T7N8 215 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 SSX8Q7RTT4 187 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 CDH24Q86UP0 819 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 OR51A4Q8NGJ6 313 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 DYNC2LI1Q8TCX1 351 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 FGGYQ96C11 551 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 REEP6Q96HR9 211 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 PPIL3Q9H2H8 161 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 TPK1Q9H3S4 243 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 KCNJ16Q9NPI9 418 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF275Q9NSD4 429 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 PTTG2Q9NZH5 202 aa11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 CRNNQ9UBG3 495 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-209ENST00000595803 ZNF391Q9UJN7 358 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms