RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 UBE2NP61088 152 aaKnown RBP8.6□□□□□ -1.03
PSEN1-213ENST00000555386 RAP1BP61224 184 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 RAP1AP62834 184 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 SGCAQ16586 387 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 TBRG1Q3YBR2 411 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 HSD17B12Q53GQ0 312 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 FAM27D1Q5T7N8 215 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 OTPQ5XKR4 325 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 OR7E24Q6IFN5 339 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 FAM220AQ7Z4H9 259 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 LRRC18Q8N456 261 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 RFLNBQ8N5W9 214 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF511Q8NB15 262 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 OR4M2Q8NGB6 313 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 OR6K6Q8NGW6 343 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 HSD17B8Q92506 261 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 THRSPQ92748 146 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 TRIM63Q969Q1 353 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 RBP7Q96R05 134 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 C7orf50Q9BRJ6 194 aaKnown RBP8.6□□□□□ -1.03
PSEN1-213ENST00000555386 THAP7Q9BT49 309 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-213ENST00000555386 MARCH7Q9H992 704 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 SEC61A2Q9H9S3 476 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 SLC17A5Q9NRA2 495 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 KCNN3Q9UGI6 736 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 SPATA2Q9UM82 520 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 COPS3Q9UNS2 423 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 N6AMT1Q9Y5N5 214 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 TMEM14AQ9Y6G1 99 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 PLCE1Q9P212 2302 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 NOTCH2Q04721 2471 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 UNC79Q9P2D8 2635 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 POLQO75417 2590 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 SLC22A23A1A5C7 686 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 PRSS37A4D1T9 235 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 FAM172BPA6NC97 362 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 FAM171A2A8MVW0 826 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 GSTZ1O43708 216 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-213ENST00000555386 SLC16A7O60669 478 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 TPPPO94811 219 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 HLA-HP01893 362 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 PPP3CBP16298 524 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 SLC6A1P30531 599 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 MMP15P51511 669 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 BLVRAP53004 296 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 HCCSP53701 268 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 OR10A3P58181 314 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 EGR3Q06889 387 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 ETFDHQ16134 617 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 TATDN3Q17R31 274 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 CEP78Q5JTW2 689 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 TIMM23BQ5SRD1 257 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF57Q68EA5 555 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-213ENST00000555386 ANKRD16Q6P6B7 361 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 CDH24Q86UP0 819 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 CDC20BQ86Y33 519 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 TIGD4Q8IY51 512 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 TCTE3Q8IZS6 198 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF295-AS1Q8N0V1 137 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 WDR31Q8NA23 367 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 OR51L1Q8NGJ5 315 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 SMAP2Q8WU79 429 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-213ENST00000555386 ZNRF4Q8WWF5 429 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 BCL2L2Q92843 193 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-213ENST00000555386 PLPPR2Q96GM1 343 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 TSSK2Q96PF2 358 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 FOXB1Q99853 325 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 MRPL13Q9BYD1 178 aaKnown RBP8.59□□□□□ -1.03
PSEN1-213ENST00000555386 HDHD2Q9H0R4 259 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 SYT4Q9H2B2 425 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 SRA1Q9HD15 236 aaKnown RBP8.59□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF275Q9NSD4 429 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-213ENST00000555386 ACOXLQ9NUZ1 547 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 COPZ2Q9P299 210 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 FBN2P35556 2912 aa8.59□□□□□ -1.03
PSEN1-213ENST00000555386 A0A0B4J293 547 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 NPIPB13A6NJU9 1138 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 A6NNC1 897 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 NPIPB4C9JG80 1138 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 RPL36A-HNRNPH2H7BZ11 118 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 SIAH2O43255 324 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 GPANK1O95872 356 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 ATF1P18846 271 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 SRMP19623 302 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 SCAND1P57086 179 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 GPR176Q14439 515 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 UBE2NLQ5JXB2 153 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 FAM205BPQ63HN1 556 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 OR14A2Q96R54 314 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 SLITRK2Q9H156 845 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 NELFAQ9H3P2 528 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 WDR76Q9H967 626 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 DDX28Q9NUL7 540 aaKnown RBP8.58□□□□□ -1.04
PSEN1-213ENST00000555386 NLKQ9UBE8 527 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 SLC25A15Q9Y619 301 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 CACNG2Q9Y698 323 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 APCP25054 2843 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 DSCAMO60469 2012 aa8.58□□□□□ -1.04
PSEN1-213ENST00000555386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms