RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 C6orf15Q6UXA7 325 aaPredicted RBP11.85□□□□□ -0.51
TNC-212ENST00000542877 PSENENQ9NZ42 101 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 LAMP3Q9UQV4 416 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 HDGFL3Q9Y3E1 203 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 MICAL3Q7RTP6 2002 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 AQP7O14520 342 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SCO1O75880 301 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 OTOSQ8NHW6 89 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 RPUSD4Q96CM3 377 aaKnown RBP11.85□□□□□ -0.51
TNC-212ENST00000542877 TVP23CQ96ET8 276 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 OPA3Q9H6K4 179 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SDK1Q7Z5N4 2213 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SERTM1A2A2V5 107 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 ANKRD16Q6P6B7 361 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 MAMSTRQ6ZN01 415 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 TMEM18Q96B42 140 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 C12orf57Q99622 126 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 RHOFQ9HBH0 211 aa11.85□□□□□ -0.51
TNC-212ENST00000542877 SIRPB1O00241 398 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 THBS4P35443 961 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 SLC25A1P53007 311 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 CLN3Q13286 438 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ELFN2Q5R3F8 820 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 KMT5CQ86Y97 462 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 MSRB3Q8IXL7 192 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ZDHHC22Q8N966 263 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 OR5B3Q8NH48 314 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 CCL4L1Q8NHW4 92 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 TTC9Q92623 222 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 HGDQ93099 445 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ZNF586Q9NXT0 402 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ING1Q9UK53 422 aaPredicted RBP11.84□□□□□ -0.51
TNC-212ENST00000542877 MYO5AQ9Y4I1 1855 aaKnown RBP11.84□□□□□ -0.51
TNC-212ENST00000542877 PLPP2O43688 288 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 FABP6P51161 128 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ZNF121P58317 390 aaPredicted RBP11.84□□□□□ -0.51
TNC-212ENST00000542877 BTLAQ7Z6A9 289 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ADGRG3Q86Y34 549 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ZDHHC23Q8IYP9 409 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 OSR2Q8N2R0 312 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 OR1J1Q8NGS3 322 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ST3GAL6Q9Y274 331 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 FAM221AA4D161 298 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 DHHO43323 396 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 CT45A10P0DMU9 189 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 NDUFB7P17568 137 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 HOXC8P31273 242 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 WNT3P56703 355 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
TNC-212ENST00000542877 TMEM88Q6PEY1 159 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 BCL7CQ8WUZ0 217 aaPredicted RBP11.84□□□□□ -0.51
TNC-212ENST00000542877 PP6455Q8WZ26 134 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 TECTBQ96PL2 329 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 RBM38Q9H0Z9 239 aaKnown RBP11.84□□□□□ -0.51
TNC-212ENST00000542877 ALS2Q96Q42 1657 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 MEIKINA0A087WXM9 373 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 C5orf49A4QMS7 147 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 ABCD4O14678 606 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 CNIH1O95406 144 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 CTRB1P17538 263 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 KIAA0040Q15053 153 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 SHHQ15465 462 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 CTRB2Q6GPI1 263 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 NECAP1Q8NC96 275 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 IL21Q9HBE4 155 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 SIGLEC7Q9Y286 467 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 GON4LQ3T8J9 2241 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
TNC-212ENST00000542877 A0A0B4J2E0 115 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 A0A1B0GX12 115 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 OR2J2O76002 312 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 ATF1P18846 271 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 CSN1S1P47710 185 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 EMP3P54852 163 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 PPP2CBP62714 309 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 PPP2CAP67775 309 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 RAE1P78406 368 aaKnown RBP11.83□□□□□ -0.52
TNC-212ENST00000542877 NCR3LG1Q68D85 454 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 ZADH2Q8N4Q0 377 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 NUDT9Q9BW91 350 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 DDX60LQ5H9U9 1706 aaKnown RBP11.83□□□□□ -0.52
TNC-212ENST00000542877 G3V3Q6 166 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 LIMS3P0CW19 117 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 LIMS4P0CW20 117 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 RRASP10301 218 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 RAB13P51153 203 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 HMGA2P52926 109 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 GUCA2AQ02747 115 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
TNC-212ENST00000542877 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 GPR32P1Q8NGA4 272 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 OR4S1Q8NGB4 309 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 EXOGQ9Y2C4 368 aaKnown RBP11.83□□□□□ -0.52
TNC-212ENST00000542877 KCNE3Q9Y6H6 103 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 ANKUB1A6NFN9 424 aa11.83□□□□□ -0.52
TNC-212ENST00000542877 TERTO14746 1132 aaKnown RBP11.83□□□□□ -0.52
TNC-212ENST00000542877 IAPPP10997 89 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms