RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 FAM222BQ8WU58 562 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 REEP6Q96HR9 211 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 BCL2L14Q9BZR8 327 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PTTG3PQ9NZH4 202 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CSMD2Q7Z408 3487 aa16.29■□□□□ 0.2
TNFRSF1A-213ENST00000540022 LOC107986453A0A1B0GWG9 222 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ACHEP22303 614 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 LOXP28300 417 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GABRA5P31644 462 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 MAGEB1P43366 347 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 NKX6-1P78426 367 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SNTB2Q13425 540 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 GK2Q14410 553 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 INSL4Q14641 139 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 COMMD2Q86X83 199 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR5L1Q8NGL2 311 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SLC25A40Q8TBP6 338 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SPSB4Q96A44 273 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 FAM71F1Q96KD3 344 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 OR2J1Q9GZK6 312 aa16.28■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RTTNQ86VV8 2226 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 CCL1P22362 96 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 MALLQ13021 153 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 HLXQ14774 488 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 YIF1BQ5BJH7 314 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 ADAM5Q6NVV9 412 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 SLC22A25Q6T423 547 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 UNQ6126/PRO20091Q6UXV3 157 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 MS4A15Q8N5U1 240 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 PLPP7Q8NBV4 271 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 HS3ST6Q96QI5 342 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 FUNDC2Q9BWH2 189 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 RGCCQ9H4X1 137 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 HHLA2Q9UM44 414 aa16.27■□□□□ 0.2
TNFRSF1A-213ENST00000540022 hCG_38984A0A1B0GV85 526 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 A0A1B0GVI7 797 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SHISA9B4DS77 424 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SYT7O43581 403 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CD3EP07766 207 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 COX6B1P14854 86 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GADD45AP24522 165 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MSMPQ1L6U9 139 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TMEM91Q6ZNR0 172 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GPR148Q8TDV2 347 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PIK3IP1Q96FE7 263 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MARS2Q96GW9 593 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 REPIN1Q9BWE0 567 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OR51E2Q9H255 320 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ZNF391Q9UJN7 358 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SPEF1Q9Y4P9 236 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TACC2O95359 2948 aa16.26■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TRBV5-5A0A0J9YX44 114 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 LMX1BO60663 402 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SC5DO75845 299 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PLAUP00749 431 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PSMA1P25786 263 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TTKP33981 857 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GLRXP35754 106 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CRYBB2P43320 205 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FAM3AP98173 230 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FABP5Q01469 135 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TNK1Q13470 666 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GPR107Q5VW38 600 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CD200R1LQ6Q8B3 271 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 Q6ZSR3 168 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 PGAP1Q75T13 922 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 DOK3Q7L591 496 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MRPL21Q7Z2W9 205 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 NUP37Q8NFH4 326 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 KBTBD8Q8NFY9 601 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OR14K1Q8NGZ2 314 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 AKAP1Q92667 903 aaKnown RBP eCLIP16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TRMT61AQ96FX7 289 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SPOCK3Q9BQ16 436 aa16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 NAA50Q9GZZ1 169 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GPX5O75715 221 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 HLA-DPB1P04440 258 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MPV17P39210 176 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 SOX2P48431 317 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TRAM1Q15629 374 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ACSM3Q53FZ2 586 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 VHLLQ6RSH7 139 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 FBXW12Q6X9E4 464 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 C1orf174Q8IYL3 243 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 KLF14Q8TD94 323 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 RPL3LQ92901 407 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CMBLQ96DG6 245 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OR14A2Q96R54 314 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 STUB1Q9UNE7 303 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 RNF115Q9Y4L5 304 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ATP23Q9Y6H3 246 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 MYO9AB2RTY4 2548 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GABRPO00591 440 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 DHRS3O75911 302 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 OCM2P0CE71 109 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 TUBG1P23258 451 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 CFL1P23528 166 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 ACKR3P25106 362 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 THBS4P35443 961 aa16.24■□□□□ 0.19
TNFRSF1A-213ENST00000540022 GSK3AP49840 483 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms