RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 MT-ND5P03915 603 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 PCMT1P22061 227 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 CCNOP22674 350 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 SLC6A9P48067 706 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 ETV1P50549 477 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 GBX2P52951 348 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 GRB2P62993 217 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 PSG4Q00888 419 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 GALK2Q01415 458 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 MVKQ03426 396 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 ECH1Q13011 328 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 PCK2Q16822 640 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF774Q6NX45 483 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 SSX6Q7RTT6 188 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF283Q8N7M2 679 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 ST7LQ8TDW4 575 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 FCGR1BQ92637 280 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 SPTSSAQ969W0 71 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 MAP6Q96JE9 813 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 C4orf36Q96KX1 117 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 OR8B4Q96RC9 309 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 KCNS3Q9BQ31 491 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 JAM3Q9BX67 310 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 CDCA4Q9BXL8 241 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 MRPS26Q9BYN8 205 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 ELOVL3Q9HB03 270 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 CLEC2DQ9UHP7 191 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 SCOCQ9UIL1 159 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 GTF2A1LQ9UNN4 478 aa10.67□□□□□ -0.7
CLSTN3-208ENST00000538933 TMEM129A0AVI4 362 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 OR6C6A6NF89 314 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 METTL15A6NJ78 407 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 B4DSR2 109 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 J3QRE1 110 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF254O75437 659 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 SULT1C4O75897 302 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 RPP14O95059 124 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 APOC1P02654 83 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 MMP7P09237 267 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 LIMS3P0CW19 117 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 LIMS4P0CW20 117 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 HSMCR30P0CW71 290 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 PSKH1P11801 424 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 DAOP14920 347 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 SERPINF1P36955 418 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 MAP2K4P45985 399 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 GDI2P50395 445 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 IDH3GP51553 393 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 WNT4P56705 351 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 SNRPD2P62316 118 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 RAB39AQ14964 217 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 TBCEQ15813 527 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 NEDD8Q15843 81 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 TBC1D28Q2M2D7 210 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF829Q3KNS6 432 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 CDONQ4KMG0 1287 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 CCDC92Q53HC0 331 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 C1QTNF12Q5T7M4 302 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 OR2G6Q5TZ20 316 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 RNLSQ5VYX0 342 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 VASH1Q7L8A9 365 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 KCTD20Q7Z5Y7 419 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF679Q8IYX0 411 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 SYS1Q8N2H4 156 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 ZDHHC22Q8N966 263 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 OR1J2Q8NGS2 313 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 OR52N1Q8NH53 320 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 OR1F12Q8NHA8 337 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 FGFBP3Q8TAT2 258 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 RNF133Q8WVZ7 376 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 SPRYD4Q8WW59 207 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 BOD1Q96IK1 185 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 AMELYQ99218 206 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 COQ7Q99807 217 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 PLK3Q9H4B4 646 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 NIPAL2Q9H841 368 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 CDH20Q9HBT6 801 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 TRIM36Q9NQ86 728 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 SLCO1C1Q9NYB5 712 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 LRP12Q9Y561 859 aa10.66□□□□□ -0.7
CLSTN3-208ENST00000538933 B9A039 149 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 F5H5K5 113 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 MAGEB4O15481 346 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 CLPTM1O96005 669 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 AVPP01185 164 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 HTR1AP08908 422 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 HKR1P10072 659 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 COX5BP10606 129 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 CBR1P16152 277 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 STOMP27105 288 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 PSMB9P28065 219 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 PPOXP50336 477 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 PRKXP51817 358 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 TPTEP56180 551 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 OR12D2P58182 307 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 HIST1H3AP68431 136 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 MRPL28Q13084 256 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 SCGB2A2Q13296 93 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 EFNB3Q15768 340 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms