RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 GBA3Q9H227 469 aa-2.51□□□□□ -2.81
SNORA40.16-201ENST00000517238 ORC3Q9UBD5 711 aaPredicted RBP-2.51□□□□□ -2.81
SNORA40.16-201ENST00000517238 CYB5R1Q9UHQ9 305 aa-2.51□□□□□ -2.81
SNORA40.16-201ENST00000517238 PPIEQ9UNP9 301 aaKnown RBP-2.51□□□□□ -2.81
SNORA40.16-201ENST00000517238 RBMX2Q9Y388 322 aaKnown RBP-2.51□□□□□ -2.81
SNORA40.16-201ENST00000517238 A0A087X0K7 114 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 M0QXV9 152 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 EIF3FO00303 357 aaPredicted RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CASC3O15234 703 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 EIF4E2O60573 245 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 STX11O75558 287 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 UPK3AO75631 287 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 SEMA3DO95025 777 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 IGHV2-5P01817 119 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 LGALS2P05162 132 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CTSLP07711 333 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 HIST1H2AGP0C0S8 130 aaPredicted RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 RRASP10301 218 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 PTHLHP12272 177 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CYP2B6P20813 491 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 MMP11P24347 488 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 PTPN6P29350 595 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CCR2P41597 374 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CSE1LP55060 971 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 SYNJ2BPP57105 145 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 HERV-K104P63124 156 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 MRPS6P82932 125 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 INAQ16352 499 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 TAF12Q16514 161 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 PARP6Q2NL67 630 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 TRIM16LQ309B1 348 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 SFT2D3Q587I9 215 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 C12orf60Q5U649 245 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 SYT10Q6XYQ8 523 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CCDC73Q6ZRK6 1079 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 C7orf65Q6ZTY9 151 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 UTS2BQ765I0 119 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 APTXQ7Z2E3 356 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 DCXRQ7Z4W1 244 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 HIST2H2ABQ8IUE6 130 aaPredicted RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CEP112Q8N8E3 955 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 SLC25A29Q8N8R3 303 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 MRPS31Q92665 395 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 DNASE1L2Q92874 299 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 HIST1H2ACQ93077 130 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 ADIPOR1Q96A54 375 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 YIPF6Q96EC8 236 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 C14orf79Q96F83 325 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CPB2Q96IY4 423 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 LINC00615Q96LM1 132 aaPredicted RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 DEFB118Q96PH6 123 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 NAP1L4Q99733 375 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 MLPHQ9BV36 600 aaPredicted RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 CCDC106Q9BWC9 280 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 SFXN3Q9BWM7 321 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 MRPL1Q9BYD6 325 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 RPF2Q9H7B2 306 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 WDR76Q9H967 626 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 RHOFQ9HBH0 211 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 MRPL47Q9HD33 250 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 ARID4BQ4LE39 1312 aaPredicted RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 URB1O60287 2271 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 MSH6P52701 1360 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 PTPRUQ92729 1446 aa-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 ZNF638Q14966 1978 aaKnown RBP-2.52□□□□□ -2.81
SNORA40.16-201ENST00000517238 RALGAPA2Q2PPJ7 1873 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 IGHV3-21A0A0B4J1V1 117 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 TRAV41A0A0B4J266 112 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 TMEM89A2RUT3 159 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 A6NLC8 198 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 NMT2O60551 498 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 GAS8O95995 478 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 HSP90AB1P08238 724 aaKnown RBP-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 KRT16P08779 473 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 TCN1P20061 433 aaPredicted RBP-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 RAB3AP20336 220 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 ARL3P36405 182 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 CEACAM3P40198 252 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 RGS6P49758 472 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 P2RX1P51575 399 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 TMEM258P61165 79 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 OGDHQ02218 1023 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 COX6A2Q02221 97 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 NCBP1Q09161 790 aaKnown RBP-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 RIPPLY1Q0D2K3 151 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 PNOCQ13519 176 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 C10orf120Q5SQS8 335 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 ARMC4Q5T2S8 1044 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 OR2G6Q5TZ20 316 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 GIMAP6Q6P9H5 292 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 ENPP6Q6UWR7 440 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 CCDC121Q6ZUS5 278 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 ZNF550Q7Z398 422 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 ZFAND2AQ8N6M9 145 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 PLPP5Q8NEB5 264 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 ERMNQ8TAM6 284 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 P3H4Q92791 437 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 GHSRQ92847 366 aa-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 PINX1Q96BK5 328 aaKnown RBP-2.53□□□□□ -2.81
SNORA40.16-201ENST00000517238 RMDN2Q96LZ7 410 aa-2.53□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms