RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 CNDP1Q96KN2 507 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 SERPINB12Q96P63 405 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 DERL3Q96Q80 235 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 TESK2Q96S53 571 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 SLF1Q9BQI6 1058 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 MRPL9Q9BYD2 267 aaKnown RBP-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 PLEKHF2Q9H8W4 249 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 SND1-IT1Q9HBX3 110 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 HOMER3Q9NSC5 361 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 TMEM38BQ9NVV0 291 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 IL36GQ9NZH8 169 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 KCNIP3Q9Y2W7 256 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 CACNA1SQ13698 1873 aa-1.8□□□□□ -2.7
RNU6-557P-201ENST00000516842 POLQO75417 2590 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 PLCH2O75038 1416 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 BSNQ9UPA5 3926 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 IGHV1-69DA0A0B4J2H0 117 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 A0A0J9YYE9 177 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 GMNCA6NCL1 334 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 A6NED7 52 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 OR5B21A6NL26 309 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 ZNF705FA8MVS1 300 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 SURF6O75683 361 aaKnown RBP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 EIF3GO75821 320 aaKnown RBP eCLIP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 LRATO95237 230 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 IGHV2-5P01817 119 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 TRBC1P01850 177 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 SNRPAP09012 282 aaKnown RBP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 BMI1P35226 326 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 TCF7P36402 384 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 RBM34P42696 430 aaKnown RBP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 RAP1GDS1P52306 607 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 ZNF266Q14584 549 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 PSG3Q16557 428 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 TATDN3Q17R31 274 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 KRTAP26-1Q6PEX3 210 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 KCTD9Q7L273 389 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 PDPNQ86YL7 162 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 OR5AU1Q8NGC0 362 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 TMEM186Q96B77 213 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 MRPS24Q96EL2 167 aaKnown RBP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 PIK3IP1Q96FE7 263 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 KCNS1Q96KK3 526 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 RAB3IPQ96QF0 476 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 OR8B4Q96RC9 309 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 ZNF426Q9BUY5 554 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 PRSS16Q9NQE7 514 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 ANO10Q9NW15 660 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 SLC7A8Q9UHI5 535 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 NAGKQ9UJ70 344 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 NPTNQ9Y639 398 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 COMMD3-BMI1R4GMX3 469 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 UBR4Q5T4S7 5183 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 CELSR2Q9HCU4 2923 aa-1.81□□□□□ -2.7
RNU6-557P-201ENST00000516842 EP300Q09472 2414 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 TRBV6-7A0A0A0MS04 114 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 ZW10O43264 779 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 ZNF737O75373 536 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 H2BFMP0C1H6 154 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 TALDO1P37837 337 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 RGS6P49758 472 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 UGT2B15P54855 530 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 SCN1BQ07699 218 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 PPP1R8Q12972 351 aaKnown RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 GK3PQ14409 553 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 LRRC75BQ2VPJ9 315 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 CNSTQ6PJW8 725 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 METAP1DQ6UB28 335 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 DLEU7Q6UYE1 221 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 DPY19L4Q7Z388 723 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 LYZL2Q7Z4W2 148 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 LRRC28Q86X40 367 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 ECHDC2Q86YB7 292 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 CLEC4FQ8N1N0 589 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 OR2G2Q8NGZ5 317 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 APH1BQ8WW43 257 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 MAIP1Q8WWC4 291 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 DCPSQ96C86 337 aaKnown RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 YIPF6Q96EC8 236 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 OR4K3Q96R72 315 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 KRT23Q9C075 422 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 GABARAPL1Q9H0R8 117 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 VCX2Q9H322 139 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 VCX3AQ9NNX9 186 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 C20orf96Q9NUD7 363 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 MTFP1Q9UDX5 166 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 RASD1Q9Y272 281 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 TDRKHQ9Y2W6 561 aaKnown RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 SNURFQ9Y675 71 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 PTPRQQ9UMZ3 2332 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 SETD2Q9BYW2 2564 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 HIVEP1P15822 2718 aa-1.82□□□□□ -2.7
RNU6-557P-201ENST00000516842 TRPM3Q9HCF6 1732 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-557P-201ENST00000516842 MROH7Q68CQ1 1323 aa-1.83□□□□□ -2.7
RNU6-557P-201ENST00000516842 USP42Q9H9J4 1324 aaKnown RBP-1.83□□□□□ -2.7
RNU6-557P-201ENST00000516842 M0R1X1 148 aa-1.83□□□□□ -2.7
RNU6-557P-201ENST00000516842 LGALS8O00214 317 aa-1.83□□□□□ -2.7
RNU6-557P-201ENST00000516842 COCHO43405 550 aa-1.83□□□□□ -2.7
RNU6-557P-201ENST00000516842 SERPIND1P05546 499 aa-1.83□□□□□ -2.7
RNU6-557P-201ENST00000516842 SEC11BP0C7V7 166 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms