RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CMBLQ96DG6 245 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 ZNF385AQ96PM9 386 aaKnown RBP9.77□□□□□ -0.85
CMSS1-208ENST00000496116 SLC6A7Q99884 636 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 RBM24Q9BX46 236 aaKnown RBP9.77□□□□□ -0.85
CMSS1-208ENST00000496116 SELENOIQ9C0D9 397 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 ZNF319Q9P2F9 582 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 AUP1Q9Y679 476 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 WIPF3A6NGB9 483 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 OR6C65A6NJZ3 312 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 TNFSF11O14788 317 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 ACP1P24666 158 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SRD5A2P31213 254 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 S100A11P31949 105 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SLC6A9P48067 706 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 P2RX3P56373 397 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 CXADRP78310 365 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SIGLEC14Q08ET2 396 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 NKPD1Q17RQ9 610 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 C2orf68Q2NKX9 166 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 LIN54Q6MZP7 749 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 LPCAT3Q6P1A2 487 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 OR5AS1Q8N127 324 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 ZDHHC22Q8N966 263 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 OR13C8Q8NGS7 320 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 OR14K1Q8NGZ2 314 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 NUDCD2Q8WVJ2 157 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 KCNE4Q8WWG9 221 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SFXN2Q96NB2 322 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SPACA5Q96QH8 159 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 URM1Q9BTM9 101 aaKnown RBP9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SF3B5Q9BWJ5 86 aaKnown RBP9.76□□□□□ -0.85
CMSS1-208ENST00000496116 TMEM59Q9BXS4 323 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 GSX2Q9BZM3 304 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 ULBP2Q9BZM5 246 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 PADI1Q9ULC6 663 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 MED12Q93074 2177 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 FXYD6-FXYD2A0A087WZ82 144 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 A0A0J9YW62 118 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 A0A0U1RQV5 110 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 OR14I1A6ND48 311 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 F5H5K5 113 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 CDC14BO60729 498 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 RP2O75695 350 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 STK17BO94768 372 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 MPIG6BO95866 241 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 HLA-AP01891 365 aaKnown RBP9.76□□□□□ -0.85
CMSS1-208ENST00000496116 IFNA6P05013 189 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 GSTP1P09211 210 aaKnown RBP9.76□□□□□ -0.85
CMSS1-208ENST00000496116 OR3A4PP47883 348 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SUCLG1P53597 346 aaKnown RBP9.76□□□□□ -0.85
CMSS1-208ENST00000496116 RAC3P60763 192 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 FGL1Q08830 312 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 ECH1Q13011 328 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 DHRS2Q13268 280 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 C1QTNF12Q5T7M4 302 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 TMEM123Q8N131 208 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 LRRC18Q8N456 261 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 GVQW1Q8N7I0 195 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 CCDC54Q8NEL0 328 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 UCN2Q96RP3 112 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 SOX7Q9BT81 388 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 FXYD6Q9H0Q3 95 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 CST11Q9H112 138 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 LPAR5Q9H1C0 372 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 GHRLQ9UBU3 117 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 KCNN3Q9UGI6 736 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 TCFL5Q9UL49 500 aa9.76□□□□□ -0.85
CMSS1-208ENST00000496116 RPS10-NUDT3A0A1W2PQS6 291 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 MTRF1O75570 445 aaKnown RBP9.75□□□□□ -0.85
CMSS1-208ENST00000496116 DHRS3O75911 302 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 CFDP00746 253 aaPredicted RBP9.75□□□□□ -0.85
CMSS1-208ENST00000496116 CD34P28906 385 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 OTX2P32243 289 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 HRH1P35367 487 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 THBS4P35443 961 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 CASRP41180 1078 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 CHAF1BQ13112 559 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 ENDOGQ14249 297 aaKnown RBP9.75□□□□□ -0.85
CMSS1-208ENST00000496116 PHYHD1Q5SRE7 291 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 DCAF12L2Q5VW00 463 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 NAXDQ8IW45 347 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 STEAP2Q8NFT2 490 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 OR56B1Q8NGI3 324 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 SPTSSAQ969W0 71 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 NABP1Q96AH0 204 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 RAB3CQ96E17 227 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 WDR89Q96FK6 387 aaPredicted RBP9.75□□□□□ -0.85
CMSS1-208ENST00000496116 NICN1Q9BSH3 213 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 FOXD3Q9UJU5 478 aaPredicted RBP9.75□□□□□ -0.85
CMSS1-208ENST00000496116 NOP16Q9Y3C1 178 aaKnown RBP9.75□□□□□ -0.85
CMSS1-208ENST00000496116 KIAA1549Q9HCM3 1950 aa9.75□□□□□ -0.85
CMSS1-208ENST00000496116 RFPL4AA6NLU0 287 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 RFPL4AL1F8VTS6 287 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 CRTAPO75718 401 aaPredicted RBP9.74□□□□□ -0.85
CMSS1-208ENST00000496116 HPP00738 406 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 IGLV3-1P01715 115 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 PPP3CBP16298 524 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 TCN2P20062 427 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 ENPP1P22413 925 aa9.74□□□□□ -0.85
CMSS1-208ENST00000496116 AGTR1P30556 359 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms