RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 DOCK2Q92608 1830 aa13.27□□□□□ -0.28
EPHB4-206ENST00000487222 PDGFBP01127 241 aaPredicted RBP13.27□□□□□ -0.28
EPHB4-206ENST00000487222 APOA2P02652 100 aa13.27□□□□□ -0.28
EPHB4-206ENST00000487222 GABRA4P48169 554 aa13.27□□□□□ -0.28
EPHB4-206ENST00000487222 SSX1Q16384 188 aa13.27□□□□□ -0.28
EPHB4-206ENST00000487222 FAM74A1Q5RGS3 127 aa13.27□□□□□ -0.28
EPHB4-206ENST00000487222 CD300LDQ6UXZ3 194 aa13.27□□□□□ -0.28
EPHB4-206ENST00000487222 SLC17A5Q9NRA2 495 aa13.27□□□□□ -0.28
EPHB4-206ENST00000487222 LTBP4Q8N2S1 1624 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 FAM221AA4D161 298 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 RFPL4AA6NLU0 287 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 RFPL4AL1F8VTS6 287 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 CXCL13O43927 109 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 NDUFB6O95139 128 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 GSK3AP49840 483 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 PIGPP57054 158 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 ZNF121P58317 390 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-206ENST00000487222 DHODHQ02127 395 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 ZNF468Q5VIY5 522 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-206ENST00000487222 OTPQ5XKR4 325 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 TMEM123Q8N131 208 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 CISD2Q8N5K1 135 aaKnown RBP13.27□□□□□ -0.29
EPHB4-206ENST00000487222 DLL4Q9NR61 685 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 OR6C68A6NDL8 312 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 ARPC3O15145 178 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 OR2J2O76002 312 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 ZNF793Q6ZN11 406 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 ZNF683Q8IZ20 524 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 FAM185AQ8N0U4 392 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 OR10P1Q8NGE3 313 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 LIN7CQ9NUP9 197 aaKnown RBP13.27□□□□□ -0.29
EPHB4-206ENST00000487222 PRSS44E7EML9 344 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 IGHA2P01877 340 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 GLB1P16278 677 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 SUB1P53999 127 aaKnown RBP eCLIP13.27□□□□□ -0.299e-7■■■□□ 17.7
EPHB4-206ENST00000487222 UQCC2Q9BRT2 126 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 PLEKHB1Q9UF11 243 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-206ENST00000487222 PPP1R3CQ9UQK1 317 aa13.27□□□□□ -0.29
EPHB4-206ENST00000487222 LILRA5A6NI73 299 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 S100A8P05109 93 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ZGLP1P0C6A0 271 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 GUCA2AQ02747 115 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ENDOGQ14249 297 aaKnown RBP13.26□□□□□ -0.29
EPHB4-206ENST00000487222 PHYHD1Q5SRE7 291 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 LILRA6Q6PI73 481 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 OR5AP2Q8NGF4 316 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 MMP25Q9NPA2 562 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ZNF331Q9NQX6 463 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-206ENST00000487222 TTC3P53804 2025 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 PAPPA2Q9BXP8 1791 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 K7EQM0 130 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 DTYMKP23919 212 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 FOXF1Q12946 379 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ELFN2Q5R3F8 820 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 C9orf50Q5SZB4 431 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 THNSL2Q86YJ6 484 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 PP6455Q8WZ26 134 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 CORO2AQ92828 525 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 PELI1Q96FA3 418 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 SLC23A1Q9UHI7 598 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ST3GAL6Q9Y274 331 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 C5orf49A4QMS7 147 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 CCL11P51671 97 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 PCBP4P57723 403 aaKnown RBP13.26□□□□□ -0.29
EPHB4-206ENST00000487222 RPS23P62266 143 aaKnown RBP13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ZFP62Q8NB50 900 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ACTR3CQ9C0K3 210 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-206ENST00000487222 TGIF2Q9GZN2 237 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 CRLF2Q9HC73 371 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 BRWD1Q9NSI6 2320 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 ANKUB1A6NFN9 424 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 PRSS23O95084 383 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 MBP02144 154 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 PCMT1P22061 227 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 C11orf87Q6NUJ2 197 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 SLC25A26Q70HW3 274 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 IFI44Q8TCB0 444 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 SLC35E1Q96K37 410 aa13.26□□□□□ -0.29
EPHB4-206ENST00000487222 KLF13Q9Y2Y9 288 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-206ENST00000487222 RREB1Q92766 1687 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 A0A1W2PPH5 198 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 OR10J4P0C629 311 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
EPHB4-206ENST00000487222 KTI12Q96EK9 354 aaPredicted RBP13.25□□□□□ -0.29
EPHB4-206ENST00000487222 MENTQ9BUN1 341 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 EXOGQ9Y2C4 368 aaKnown RBP13.25□□□□□ -0.29
EPHB4-206ENST00000487222 LRP12Q9Y561 859 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 MEIKINA0A087WXM9 373 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 SPTY2D1-AS1A0A0U1RR47 76 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 RAB27BO00194 218 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 THBS4P35443 961 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 FAM58AQ8N1B3 248 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 OR8U1Q8NH10 309 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 ANGPTL6Q8NI99 470 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 IP6K3Q96PC2 410 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 EGLN1Q9GZT9 426 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 CDK5RAP2Q96SN8 1893 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 SIRPB1O00241 398 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 TXNDC12O95881 172 aa13.25□□□□□ -0.29
EPHB4-206ENST00000487222 FABP1P07148 127 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms