RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZNF264O43296 627 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 RENP00797 406 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 CSTAP01040 98 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 SMIM10L1P0DMW3 83 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 TMEM33P57088 247 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 FAM3AP98173 230 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 DHCR24Q15392 516 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 HSPB2Q16082 182 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 NNATQ16517 81 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 FAM78AQ5JUQ0 283 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 FBXO42Q6P3S6 717 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 TMEM184AQ6ZMB5 413 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 CATSPERDQ86XM0 798 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 LYPD6Q86Y78 171 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 Q8WTZ3 238 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 SMIM10Q96HG1 83 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 RTBDNQ9BSG5 229 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-205ENST00000483122 RAB11FIP5Q9BXF6 653 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 LRIT1Q9P2V4 623 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 HS3ST3B1Q9Y662 390 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 LINC01553A4QN01 128 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 K7EPK0 472 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 MASP2O00187 686 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 JTBO76095 146 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 TXNDC12O95881 172 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 SNRPCP09234 159 aaKnown RBP10.52□□□□□ -0.73
VTI1A-205ENST00000483122 SPARCP09486 303 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 SLC35G6P0C7Q6 338 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 LINC00271P0C7V0 271 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 PET100P0DJ07 73 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 RABIFP47224 123 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 CLDN6P56747 220 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 TCEA2Q15560 299 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 RPUSD3Q6P087 351 aaKnown RBP10.52□□□□□ -0.73
VTI1A-205ENST00000483122 CACUL1Q86Y37 369 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 SLC39A11Q8N1S5 342 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 FAM71E2Q8N5Q1 922 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 GATSQ8NAP1 163 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 NT5CQ8TCD5 201 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 ERGIC1Q969X5 290 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 PTX4Q96A99 478 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 CNTNAP3Q9BZ76 1288 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 FAM212BQ9NTI7 297 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-205ENST00000483122 CUTCQ9NTM9 273 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 GDE1Q9NZC3 331 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 LOC101059948A0A1B0GTJ6 334 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 PRRT4C9JH25 899 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 FOXS1O43638 330 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF217O75362 1048 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 GPR75O95800 540 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 GAPDHP04406 335 aaKnown RBP10.51□□□□□ -0.73
VTI1A-205ENST00000483122 CA3P07451 260 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 CISD3P0C7P0 127 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 DANCRP0C864 163 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 COX5BP10606 129 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 SLC2A1P11166 492 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 FABP4P15090 132 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 C5AR1P21730 350 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 CAMLGP49069 296 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 RPS15AP62244 130 aaKnown RBP10.51□□□□□ -0.73
VTI1A-205ENST00000483122 TCEAL5Q5H9L2 206 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 COMMD1Q8N668 190 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 OR10AD1Q8NGE0 317 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 MMP25Q9NPA2 562 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 WASF3Q9UPY6 502 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 URGCP-MRPS24S4R325 110 aa10.51□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF587BE7ETH6 402 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 HRKO00198 91 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 PPP1R2P9O14990 202 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 CTSVO60911 334 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 C8AP07357 584 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 MYOGP15173 224 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 GLRA1P23415 457 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 CHATP28329 748 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 P2RY2P41231 377 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 RELQ04864 619 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-205ENST00000483122 ENPP2Q13822 863 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 USF2Q15853 346 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF141Q15928 474 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 OPN5Q6U736 354 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 DTWD2Q8NBA8 298 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 AVL9Q8NBF6 648 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 OR4C3Q8NH37 302 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 RSC1A1Q92681 617 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 CTHRC1Q96CG8 243 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 RARRES2Q99969 163 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 NICN1Q9BSH3 213 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 C19orf12Q9NSK7 152 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 MRPL22Q9NWU5 206 aaKnown RBP10.5□□□□□ -0.73
VTI1A-205ENST00000483122 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 LOC107986453A0A1B0GWG9 222 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 MEGF11A6BM72 1044 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 OR5H15A6NDH6 313 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 OR5H1A6NKK0 313 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 ASAH2BP0C7U1 165 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 VSIG8P0DPA2 414 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 PAX1P15863 534 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 CTNNB1P35222 781 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 PPP1CCP36873 323 aaKnown RBP10.5□□□□□ -0.73
VTI1A-205ENST00000483122 GABRA4P48169 554 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms