RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 MTCH2Q9Y6C9 303 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 CCDC187A0A096LP49 1063 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 ISG15P05161 165 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 ASAH2BP0C7U1 165 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 PNMTP11086 282 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 IL2RGP31785 369 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 CTNNB1P35222 781 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 SPOCK1Q08629 439 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 UNC119Q13432 240 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 EXOSC7Q15024 291 aaKnown RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 JOSD1Q15040 202 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 COL13A1Q5TAT6 717 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 KCTD18Q6PI47 426 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 C17orf99Q6UX52 265 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 LHFPL1Q86WI0 220 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 OR8G5Q8NG78 346 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 CMBLQ96DG6 245 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 PACRGQ96M98 296 aaPredicted RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 WDR92Q96MX6 357 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 TSPAN32Q96QS1 320 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 LMF2Q9BU23 707 aaKnown RBP9.5□□□□□ -0.89
SIK3-210ENST00000480468 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 CCL26Q9Y258 94 aa9.5□□□□□ -0.89
SIK3-210ENST00000480468 PUS1Q9Y606 427 aaKnown RBP eCLIP9.5□□□□□ -0.89
SIK3-210ENST00000480468 C9J4A7 227 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 GPR75O95800 540 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 CRYABP02511 175 aaKnown RBP9.49□□□□□ -0.89
SIK3-210ENST00000480468 GSTP1P09211 210 aaKnown RBP9.49□□□□□ -0.89
SIK3-210ENST00000480468 CXCL1P09341 107 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 SPARCP09486 303 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 SLC35G6P0C7Q6 338 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 OR13C7P0DN81 318 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 FABP4P15090 132 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 ZNF10P21506 573 aaPredicted RBP9.49□□□□□ -0.89
SIK3-210ENST00000480468 HSD11B1P28845 292 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 RPS27P42677 84 aaKnown RBP9.49□□□□□ -0.89
SIK3-210ENST00000480468 P2RY1P47900 373 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 NPY4RP50391 375 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 CLDN6P56747 220 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 FKBP1BP68106 108 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 BTG2P78543 158 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 TNFRSF9Q07011 255 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 NUP54Q7Z3B4 507 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 GRASPQ7Z6J2 395 aaPredicted RBP9.49□□□□□ -0.89
SIK3-210ENST00000480468 ZNF440Q8IYI8 595 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 CSNK1A1LQ8N752 337 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 AVL9Q8NBF6 648 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 METTL21AQ8WXB1 218 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 MVB12AQ96EY5 273 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 RCC1LQ96I51 464 aaKnown RBP9.49□□□□□ -0.89
SIK3-210ENST00000480468 NELFAQ9H3P2 528 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 MMP25Q9NPA2 562 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 ZDHHC4Q9NPG8 344 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 GSKIPQ9P0R6 139 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 FBXO7Q9Y3I1 522 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 OR1A2Q9Y585 309 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 CEP350Q5VT06 3117 aa9.49□□□□□ -0.89
SIK3-210ENST00000480468 TMEM269A0A1B0GVZ9 245 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 A0A1W2PRU2 124 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 MASP2O00187 686 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 NRG2O14511 850 aaPredicted RBP9.48□□□□□ -0.89
SIK3-210ENST00000480468 RAMP1O60894 148 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 TIMP1P01033 207 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 HEXBP07686 556 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 CHRM2P08172 466 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 SELPP16109 830 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 ID2Q02363 134 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 MFGE8Q08431 387 aaPredicted RBP9.48□□□□□ -0.89
SIK3-210ENST00000480468 FAM53BQ14153 422 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 LY6G5CQ5SRR4 150 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 AKR1C8PQ5T2L2 129 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 OR2T2Q6IF00 324 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 C9orf40Q8IXQ3 194 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 OR13C3Q8NGS6 347 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 NKD1Q969G9 470 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 R3HDM4Q96D70 268 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 RAB39BQ96DA2 213 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 TM4SF19Q96DZ7 209 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 ACTR3CQ9C0K3 210 aaPredicted RBP9.48□□□□□ -0.89
SIK3-210ENST00000480468 OR11A1Q9GZK7 315 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 SMOC1Q9H4F8 434 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 FANCMQ8IYD8 2048 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 SCN3AQ9NY46 2000 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 H3BQ15 152 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 H7C1C5 153 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 FGF17O60258 216 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 IGKV1D-16P01601 117 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 GNB3P16520 340 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 LCN6P62502 163 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 PSG6Q00889 435 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 ZNF117Q03924 483 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 RPL18Q07020 188 aaKnown RBP9.48□□□□□ -0.89
SIK3-210ENST00000480468 IAH1Q2TAA2 248 aaPredicted RBP9.48□□□□□ -0.89
SIK3-210ENST00000480468 OR13C9Q8NGT0 318 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 MFSD8Q8NHS3 518 aa9.48□□□□□ -0.89
SIK3-210ENST00000480468 DOK4Q8TEW6 326 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms