RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 RHEBQ15382 184 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 DEFB110Q30KQ9 67 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 C1QL3Q5VWW1 255 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 ZNF529Q6P280 563 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 LHFPL1Q86WI0 220 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 OR8U1Q8NH10 309 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 BCL2L14Q9BZR8 327 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 RNF208Q9H0X6 261 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 HCRTR2O43614 444 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 HIST1H1DP16402 221 aaKnown RBP17.54■□□□□ 0.4
SDF4-205ENST00000465727 UCP2P55851 309 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 CLDN6P56747 220 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 C1QL4Q86Z23 238 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.54■□□□□ 0.4
SDF4-205ENST00000465727 OR9K2Q8NGE7 335 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 OR5H2Q8NGV7 314 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 RAB3CQ96E17 227 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 LPAR5Q9H1C0 372 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 LMAN1LQ9HAT1 526 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 FAM212BQ9NTI7 297 aaPredicted RBP17.54■□□□□ 0.4
SDF4-205ENST00000465727 PPP4R1LQ9P1A2 415 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 DMRT1Q9Y5R6 373 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 MKI67P46013 3256 aaKnown RBP17.54■□□□□ 0.4
SDF4-205ENST00000465727 CACNA1IQ9P0X4 2223 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 A6NLC8 198 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 K7EPK0 472 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 NPIPB7O75200 414 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 NSA2O95478 260 aaKnown RBP17.54■□□□□ 0.4
SDF4-205ENST00000465727 TSPAN15O95858 294 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 H2BFMP0C1H6 154 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 PGCP20142 388 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 RAB5CP51148 216 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 KRBOX4Q5JUW0 171 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 ZNF761Q86XN6 746 aaPredicted RBP17.54■□□□□ 0.4
SDF4-205ENST00000465727 FAM71E2Q8N5Q1 922 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 WDSUB1Q8N9V3 476 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 KLHDC3Q9BQ90 382 aa17.54■□□□□ 0.4
SDF4-205ENST00000465727 FRG2CA6NGY1 282 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 A6NIZ1 184 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 H0Y8X5 98 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 PLPP3O14495 311 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 TXNL1O43396 289 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 MPZL1O95297 269 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 SNRNP70P08621 437 aaKnown RBP17.53■□□□□ 0.4
SDF4-205ENST00000465727 RPL12P30050 165 aaKnown RBP17.53■□□□□ 0.4
SDF4-205ENST00000465727 MAS1LP35410 378 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 ZNF93P35789 620 aaPredicted RBP17.53■□□□□ 0.4
SDF4-205ENST00000465727 SNCAP37840 140 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 AKR1C3P42330 323 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 SLC26A5P58743 744 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 RAP1BP61224 184 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 RAP1AP62834 184 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 ERV3-1Q14264 604 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 SURF2Q15527 256 aaPredicted RBP17.53■□□□□ 0.4
SDF4-205ENST00000465727 POMZP3Q6PJE2 187 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 COX15Q7KZN9 410 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 UBAC2Q8NBM4 344 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 OR1J1Q8NGS3 322 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 INTS12Q96CB8 462 aaKnown RBP17.53■□□□□ 0.4
SDF4-205ENST00000465727 SLC46A1Q96NT5 459 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 CNTNAP3Q9BZ76 1288 aa17.53■□□□□ 0.4
SDF4-205ENST00000465727 ZNF729A6NN14 1252 aaPredicted RBP17.52■□□□□ 0.4
SDF4-205ENST00000465727 SYT7O43581 403 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 CTSBP07858 339 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 GP1BBP13224 206 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 FCARP24071 287 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 SLC37A1P57057 533 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 RAB1AP62820 205 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 GPM6BQ13491 265 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 PTCRAQ6ISU1 281 aaPredicted RBP17.52■□□□□ 0.4
SDF4-205ENST00000465727 TMPRSS9Q7Z410 1059 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 ZNF101Q8IZC7 436 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 OR2I1PQ8NGU4 316 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 KCNG3Q8TAE7 436 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 RNF133Q8WVZ7 376 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 BMFQ96LC9 184 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 PAPOLGQ9BWT3 736 aaKnown RBP17.52■□□□□ 0.4
SDF4-205ENST00000465727 NXF5Q9H1B4 397 aaKnown RBP17.52■□□□□ 0.4
SDF4-205ENST00000465727 PTGES2Q9H7Z7 377 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 CUTCQ9NTM9 273 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 FAM206AQ9NX38 181 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 GSKIPQ9P0R6 139 aa17.52■□□□□ 0.4
SDF4-205ENST00000465727 A0A1W2PPH5 198 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 PMS2P1A4D2B8 440 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 C17orf105B2RV13 164 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 TTRP02766 147 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 RPS2P15880 293 aaKnown RBP17.52■□□□□ 0.39
SDF4-205ENST00000465727 P2RY4P51582 365 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 POLR2HP52434 150 aaKnown RBP17.52■□□□□ 0.39
SDF4-205ENST00000465727 PPP1CAP62136 330 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 HIST2H3AQ71DI3 136 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 C19orf47Q8N9M1 422 aaKnown RBP17.52■□□□□ 0.39
SDF4-205ENST00000465727 PATE1Q8WXA2 126 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 EMG1Q92979 244 aaKnown RBP17.52■□□□□ 0.39
SDF4-205ENST00000465727 FBXO17Q96EF6 278 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 ADAT3Q96EY9 351 aaPredicted RBP17.52■□□□□ 0.39
SDF4-205ENST00000465727 NICN1Q9BSH3 213 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 FBRSQ9HAH7 460 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 SRPK3Q9UPE1 567 aa17.52■□□□□ 0.39
SDF4-205ENST00000465727 OSGIN2Q9Y236 505 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms