RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 FAM25EA8MYX2 175 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 IGHG1P01857 330 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 SRFP11831 508 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 AKR1C4P17516 323 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 VAMP1P23763 118 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 ZNF41P51814 821 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 NAAAQ02083 359 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 ATXN7L3Q14CW9 347 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 KCNMB1Q16558 191 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 TMEM128Q5BJH2 165 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 BEX5Q5H9J7 111 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 ELP2Q6IA86 826 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 RABEPKQ7Z6M1 372 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 UEVLDQ8IX04 471 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 PIK3IP1Q96FE7 263 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 CHMP1AQ9HD42 196 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 SHPKQ9UHJ6 478 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 HRH3Q9Y5N1 445 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 B3GALT1Q9Y5Z6 326 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 H3BML4 177 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 PMP2P02689 132 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 HIST1H1DP16402 221 aaKnown RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 EIF3IQ13347 325 aaKnown RBP11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 MICBQ29980 383 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 PLAC9Q5JTB6 97 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 GLIPR1L1Q6UWM5 242 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 KCTD9Q7L273 389 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 OR4K17Q8NGC6 315 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 OR2AJ1Q8NGZ0 328 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 POC1BQ8TC44 478 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 MARCH1Q8TCQ1 289 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 OCSTAMPQ9BR26 566 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 GPR132Q9UNW8 380 aa11.31□□□□□ -0.6
ARHGEF3-204ENST00000465659 SPAG17Q6Q759 2223 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 ABCD4O14678 606 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 TRAF3IP2O43734 574 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 CDC14BO60729 498 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 TSPAN9O75954 239 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 FOXL2P58012 376 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 CLRN1P58418 232 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 MC2RQ01718 297 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 ZNF239Q16600 458 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 ZNF101Q8IZC7 436 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 SLC30A7Q8NEW0 376 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 SSC4DQ8WTU2 575 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 PMEPA1Q969W9 287 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 RAB3CQ96E17 227 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 SDHAF3Q9NRP4 125 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 TMEM100Q9NV29 134 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 PPP4R1LQ9P1A2 415 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 VPS13AQ96RL7 3174 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 SHISA8B8ZZ34 492 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 EEF1E1-BLOC1S5C9J1V9 151 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 GIMD1P0DJR0 217 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 LYL1P12980 280 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 ZNF17P17021 662 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 SERPINF1P36955 418 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 PTGDSP41222 190 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 ZNF169Q14929 603 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 HIST3H3Q16695 136 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 RNF144BQ7Z419 303 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 RTN4RL2Q86UN3 420 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 OR5T2Q8NGG2 359 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 OR8B12Q8NGG6 310 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 OR5L2Q8NGL0 311 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 OR2I1PQ8NGU4 316 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 OR6X1Q8NH79 312 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 THAP3Q8WTV1 239 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 NUDT22Q9BRQ3 303 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 RNF126Q9BV68 326 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 PCDHB10Q9UN67 800 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 CEP192Q8TEP8 1941 aa11.3□□□□□ -0.6
ARHGEF3-204ENST00000465659 SDK1Q7Z5N4 2213 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 TOX3O15405 576 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 NUPL2O15504 423 aaKnown RBP11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 HEXBP07686 556 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 ABOP16442 354 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 BCKDHBP21953 392 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 CBX5P45973 191 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 ZNF121P58317 390 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 GABREP78334 506 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 PEG10Q86TG7 708 aaKnown RBP11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 SLC25A45Q8N413 288 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 CLRN3Q8NCR9 226 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 WDR77Q9BQA1 342 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 MESP1Q9BRJ9 268 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 SLC6A15Q9H2J7 730 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 C5orf66Q9H5L9 145 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 RAB18Q9NP72 206 aa11.29□□□□□ -0.6
ARHGEF3-204ENST00000465659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms