RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 HCN1O60741 890 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 DPM1O60762 260 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 TBX19O60806 448 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 GPX5O75715 221 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 HPRP00739 348 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RLN2P04090 185 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ALPLP05186 524 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 HMGN2P05204 90 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 HCKP08631 526 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 OR12D1P0DN82 309 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 SPNP16150 400 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 MYL9P24844 172 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 CHATP28329 748 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 CALCRP30988 508 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 GABRA3P34903 492 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 MPIP34949 423 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 FRKP42685 505 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 OMPP47874 163 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 DNASE1L1P49184 302 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 GNG10P50151 68 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 POLR2JP52435 117 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 CDH12P55289 794 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RAB5BP61020 215 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ARG2P78540 354 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ADARB1P78563 741 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 GTF3C1Q12789 2109 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ECH1Q13011 328 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 BIKQ13323 160 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 MFAP5Q13361 173 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 DGCR6Q14129 220 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ESPL1Q14674 2120 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 LASP1Q14847 261 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 OR1C1Q15619 314 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 CEBPEQ15744 281 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 IGFBP7Q16270 282 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 EXT1Q16394 746 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 DUSP5Q16690 384 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 NDUFAF6Q330K2 333 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RNASE10Q5GAN6 216 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC35D3Q5M8T2 416 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 AVPI1Q5T686 147 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 SYT6Q5T7P8 510 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 HACD4Q5VWC8 232 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 TTC23Q5W5X9 447 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 AWAT2Q6E213 333 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 LAMTOR1Q6IAA8 161 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 H3F3CQ6NXT2 135 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 WDR73Q6P4I2 378 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 TNFAIP8L2Q6P589 184 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 MYO7BQ6PIF6 2116 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 PQLC2Q6ZP29 291 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF621Q6ZSS3 439 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 C6orf120Q7Z4R8 191 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 P2RY8Q86VZ1 359 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RNF130Q86XS8 419 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 NANOGP1Q8N7R0 232 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 YIPF7Q8N8F6 280 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 TEX45Q8NA69 505 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 GATSQ8NAP1 163 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 OR8J2Q8NGG1 315 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 OR10J5Q8NHC4 309 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF675Q8TD23 568 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 TCTEX1D2Q8WW35 142 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 MAFIPQ8WZ33 124 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 OR5P2Q8WZ92 322 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 NR4A3Q92570 626 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 CDS1Q92903 461 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 DAZLQ92904 295 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 HGDQ93099 445 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 TMEM18Q96B42 140 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 YIPF6Q96EC8 236 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 CENPNQ96H22 339 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 VSTM2LQ96N03 204 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 SFXN2Q96NB2 322 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 WFIKKN1Q96NZ8 548 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 IP6K3Q96PC2 410 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 TAAR6Q96RI8 345 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RSPO3Q9BXY4 272 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 OR51B6Q9H340 312 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RNF121Q9H920 327 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RNF122Q9H9V4 155 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 PROK2Q9HC23 129 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 HINT3Q9NQE9 182 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 POLE4Q9NR33 117 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ZCCHC3Q9NUD5 404 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 MED17Q9NVC6 651 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC25A37Q9NYZ2 338 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 CISD1Q9NZ45 108 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 KLHL13Q9P2N7 655 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 COPS7AQ9UBW8 275 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 SEC14L4Q9UDX3 406 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 WARS2Q9UGM6 360 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 PLEKHA6Q9Y2H5 1048 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A1W2PPQ1 181 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 OR5H15A6NDH6 313 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 A6NNC1 897 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 FAM166BA8MTA8 275 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 TRDCB7Z8K6 153 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PRR23D1E9PI22 279 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms