RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 KIR3DL2P43630 455 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 GRB2P62993 217 aaKnown RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 TOR2AQ5JU69 321 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF813Q6ZN06 617 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 MRPL21Q7Z2W9 205 aaKnown RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 SLC25A45Q8N413 288 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF799Q96GE5 643 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 LOXL2Q9Y4K0 774 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 A0A087WV48 116 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 F8W036 122 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 M0R036 132 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 GSTZ1O43708 216 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 CXCL13O43927 109 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 MT-CO3P00414 261 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 PVALBP20472 110 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 GALNSP34059 522 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 SUMO3P55854 103 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 BLOC1S1P78537 153 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 PCK2Q16822 640 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 RSPO4Q2I0M5 234 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 PLPP5Q8NEB5 264 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 ST8SIA4Q92187 359 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 METTL9Q9H1A3 318 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 CNTD2Q9H8S5 307 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 SDHAF2Q9NX18 166 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 TEX51A0A1B0GUA7 166 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 C7orf66A4D0T2 115 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 FAM221AA4D161 298 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 NPIPB9F8W1W9 429 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 SGCEO43556 437 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 DIRAS3O95661 229 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 WNT11O96014 354 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 UBBP0CG47 229 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 SULT1A3P0DMM9 295 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 SULT1A4P0DMN0 295 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 ADRA2CP18825 462 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 ADH6P28332 368 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 OPRM1P35372 400 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 THBS2P35442 1172 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 AKR1C2P52895 323 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 AKR1C1Q04828 323 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 EXT1Q16394 746 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 TAF9Q16594 264 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF501Q96CX3 271 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 PAPOLGQ9BWT3 736 aaKnown RBP10.38□□□□□ -0.75
NPHP4-204ENST00000460696 HRH4Q9H3N8 390 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 CALHM2Q9HA72 323 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 OCIAD1Q9NX40 245 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 PCDHGA5Q9Y5G8 931 aa10.38□□□□□ -0.75
NPHP4-204ENST00000460696 A0A1W2PQD3 144 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 CTDSPLO15194 276 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 IL5P05113 134 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 TPT1P13693 172 aaKnown RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 CSF2RBP32927 897 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 LGALSLQ3ZCW2 172 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 PRR18Q8N4B5 295 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 OR4D10Q8NGI6 311 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 SCARB1Q8WTV0 552 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 ALKBH3Q96Q83 286 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 DENND4CQ5VZ89 1909 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 CCDC163A0A0D9SF12 145 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 A0A0G2JK05 382 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 H7C2Y5 167 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 LGALS8O00214 317 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 TNFSF11O14788 317 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 TAS2R46P59540 309 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 GNMTQ14749 295 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 CNN3Q15417 329 aaKnown RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 ELFN2Q5R3F8 820 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 SFRP5Q5T4F7 317 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 TMPPEQ6ZT21 453 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 PRSS35Q8N3Z0 413 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF485Q8NCK3 441 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 NOXO1Q8NFA2 376 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 PPP1R1CQ8WVI7 109 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 ADIPOR1Q96A54 375 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 SYT3Q9BQG1 590 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF426Q9BUY5 554 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 UCK1Q9HA47 277 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 DHHO43323 396 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 TSPAN2O60636 221 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 LYPD3O95274 346 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 SERPINF1P36955 418 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 CAV2P51636 162 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 RPS27AP62979 156 aaKnown RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 UBA52P62987 128 aaKnown RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 BHLHE23Q8NDY6 225 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 OR10R2Q8NGX6 335 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 RASL10BQ96S79 203 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 GPX7Q96SL4 187 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 MFRPQ9BY79 579 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 PRO3102Q9H379 93 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 ZNF275Q9NSD4 429 aaPredicted RBP10.37□□□□□ -0.75
NPHP4-204ENST00000460696 HDGFL3Q9Y3E1 203 aa10.37□□□□□ -0.75
NPHP4-204ENST00000460696 hCG_1807616A0A1W2PRN6 198 aa10.36□□□□□ -0.75
NPHP4-204ENST00000460696 ANGPTL7O43827 346 aa10.36□□□□□ -0.75
NPHP4-204ENST00000460696 TMEM127O75204 238 aa10.36□□□□□ -0.75
NPHP4-204ENST00000460696 ICAM2P13598 275 aa10.36□□□□□ -0.75
NPHP4-204ENST00000460696 CYB561P49447 251 aa10.36□□□□□ -0.75
NPHP4-204ENST00000460696 ATP1B3P54709 279 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms