RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SMAD4Q13485 552 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 SGCAQ16586 387 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 RHBDD2Q6NTF9 364 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 GUSBP11Q6P575 273 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 DEGS2Q6QHC5 323 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 MISPQ8IVT2 679 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 BPIFCQ8NFQ6 507 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 MITD1Q8WV92 249 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 MRPL13Q9BYD1 178 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 LPAR5Q9H1C0 372 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 ALKBH4Q9NXW9 302 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 FRYQ5TBA9 3013 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 A0A0A6YYH2 397 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 A6NJ64 397 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 F5H5K5 113 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 UBBP0CG47 229 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF17P17021 662 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 RAB6AP20340 208 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 CASRP41180 1078 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 RPS27AP62979 156 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 UBA52P62987 128 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 GABREP78334 506 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF273Q14593 569 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 PLPPR5Q32ZL2 321 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 C5orf46Q6UWT4 87 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 HSD17B13Q7Z5P4 300 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF283Q8N7M2 679 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 INO80EQ8NBZ0 244 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 LHFPL5Q8TAF8 219 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 RAB3CQ96E17 227 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 ARHGAP5-AS1Q96IT6 56 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 WDR77Q9BQA1 342 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 ASF1BQ9NVP2 202 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 CSAG2Q9Y5P2 127 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 CPAMD8Q8IZJ3 1885 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 RALGAPA1Q6GYQ0 2036 aa11.99□□□□□ -0.49
HERPUD1-204ENST00000439977 MASP2O00187 686 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF208O43345 1280 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 BCL2L11O43521 198 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 TMEM50BP56557 158 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 C1QL2Q7Z5L3 287 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 OR5AS1Q8N127 324 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 CADM4Q8NFZ8 388 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 LRRC46Q96FV0 321 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 MYOTQ9UBF9 498 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 A0A0B4J2A0 478 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 FAM74A7A6NL05 159 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 SNAPC5O75971 98 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 BPNT1O95861 308 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 IGHG1P01857 330 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 PGA4P0DJD7 388 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 PGA3P0DJD8 388 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF43P17038 809 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 CX3CR1P49238 355 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 AFF3P51826 1226 aaKnown RBP11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 ARFRP1Q13795 201 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 FAM74A3Q4VXF1 159 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 TFAP2EQ6VUC0 442 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 ACOT7LQ6ZUV0 252 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 GALNTL5Q7Z4T8 443 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 TMEM200AQ86VY9 491 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 DTX1Q86Y01 620 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 FOXRED2Q8IWF2 684 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 LRRC18Q8N456 261 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 OR1S2Q8NGQ3 325 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 PTX4Q96A99 478 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 SLC25A32Q9H2D1 315 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 ELL3Q9HB65 397 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 SHPKQ9UHJ6 478 aa11.98□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF878C9JN71 531 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 SULT2B1O00204 365 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 MBTPS2O43462 519 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 CNR1P21554 472 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 SLC6A9P48067 706 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 DHPSP49366 369 aaPredicted RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 THEM4Q5T1C6 240 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 OR52H1Q8NGJ2 320 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 EDAQ92838 391 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 ADAT1Q9BUB4 502 aaKnown RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 ZNF768Q9H5H4 540 aaKnown RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 GAREM1Q9H706 876 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 CHMP1AQ9HD42 196 aaPredicted RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 TMEM14DPA8MWL7 114 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 TRAF3IP2O43734 574 aaPredicted RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 OR2F2O95006 317 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 PTGDSP41222 190 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 MC2RQ01718 297 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 OR2F1Q13607 317 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 SNTB1Q13884 538 aaKnown RBP11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 PHF19Q5T6S3 580 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 NOXO1Q8NFA2 376 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 PAQR8Q8TEZ7 354 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 TMEM59Q9BXS4 323 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 PCDHB10Q9UN67 800 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 IGKV1-9A0A0C4DH69 117 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 CDC14BO60729 498 aa11.97□□□□□ -0.49
HERPUD1-204ENST00000439977 CLDN17P56750 224 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms