RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 HIKESHIQ53FT3 197 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 MBOAT1Q6ZNC8 495 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 ABHD13Q7L211 337 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 MKXQ8IYA7 352 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 JAGN1Q8N5M9 183 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZFP41Q8N8Y5 198 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 Q8N976 141 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 Q8N9W7 124 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR5B12Q96R08 314 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 TAAR1Q96RJ0 339 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 SLC7A5P2Q9GIP4 190 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 TMEM38AQ9H6F2 299 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 DEC1Q9P2X7 70 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 CD84Q9UIB8 345 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 RHBDD3Q9Y3P4 386 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 LAMB4A4D0S4 1761 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 WDFY4Q6ZS81 3184 aa2□□□□□ -2.09
HMGB1P27-201ENST00000431429 IGLV11-55A0A075B6I3 123 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 A0A096LNJ9 63 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 IGHV3-74A0A0B4J1X5 117 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 A0A1B0GVX0 72 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 TRDMT1O14717 391 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 BCKDKO14874 412 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 KMOO15229 486 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAD51CO43502 376 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RP2O75695 350 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 FLOT1O75955 427 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 CCNB2O95067 398 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 FGFR1OPO95684 399 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 SNAI1O95863 264 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 HBE1P02100 147 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 DCNP07585 359 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 PLEKP08567 350 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 CLTAP09496 248 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 SRMP19623 302 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 CPN2P22792 545 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 HMOX2P30519 316 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 HOXA9P31269 272 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 MAGEA1P43355 309 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF133P52736 654 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAB11AP62491 216 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 MADCAM1Q13477 382 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ANGPT1Q15389 498 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAB11BQ15907 218 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RPEL1Q2QD12 228 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF658BQ4V348 819 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 CCNJQ5T5M9 372 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 PLCXD3Q63HM9 321 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 DEFB128Q7Z7B8 93 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ARIH2OSQ8N7S6 290 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 LRRC75AQ8NAA5 344 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 C11orf72Q8NBR9 251 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZFP90Q8TF47 636 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 IL22RA2Q969J5 263 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 TOP1MTQ969P6 601 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF799Q96GE5 643 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 DNAJC1Q96KC8 554 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 JSRP1Q96MG2 331 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF681Q96N22 645 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ANP32EQ9BTT0 268 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 SLC25A39Q9BZJ4 359 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 IQCGQ9H095 443 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 PARP12Q9H0J9 701 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 SAV1Q9H4B6 383 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 C8orf33Q9H7E9 229 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 SLC40A1Q9NP59 571 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 CCNB1IP1Q9NPC3 277 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ACP6Q9NPH0 428 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ISYNA1Q9NPH2 558 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 KCNJ16Q9NPI9 418 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 TMEM9BQ9NQ34 198 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 PRSS16Q9NQE7 514 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RPRD1BQ9NQG5 326 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAB23Q9ULC3 237 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 Q9Y3F1 56 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 SAR1BQ9Y6B6 198 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 WSB1Q9Y6I7 421 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 UBR2Q8IWV8 1755 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 DDX60Q8IY21 1712 aaKnown RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 TRANK1O15050 2925 aa1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 ANKRD11Q6UB99 2663 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P27-201ENST00000431429 RIF1Q5UIP0 2472 aaKnown RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 SYNRGQ9UMZ2 1314 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DNAH12Q6ZR08 3092 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 TPRP12270 2363 aaKnown RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 SPTBN4Q9H254 2564 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 A0A1B0GW55 424 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 M0R3G1 203 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 IFNW1P05000 195 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 ARG1P05089 322 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 CRYGCP07315 174 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 RETP07949 1114 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 UBCP0CG48 685 aaKnown RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUX4L2P0CJ85 424 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUX4L3P0CJ86 424 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUX4L5P0CJ88 424 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUX4L6P0CJ89 424 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUX4L7P0CJ90 424 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms