RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 A0A1B0GTI1 187 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 hCG_38984A0A1B0GV85 526 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 A0A1W2PPW3 197 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CCDC160A6NGH7 325 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 SIAH2O43255 324 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 AIREO43918 545 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 TIMM8AO60220 97 aaPredicted RBP6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 MTRF1O75570 445 aaKnown RBP6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 DHRS3O75911 302 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CLDN1O95832 211 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 SERPINA3P01011 423 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 HLA-DPB1P04440 258 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 ISG15P05161 165 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CD1AP06126 327 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CD2P06729 351 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 COX6B1P14854 86 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF12P17014 697 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CD53P19397 219 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 GADD45AP24522 165 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 MAPK3P27361 379 aaPredicted RBP6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 GCH1P30793 250 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 TTKP33981 857 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 FABP5Q01469 135 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF92Q03936 586 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 INSL4Q14641 139 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 TRAM1Q15629 374 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 TIMM50Q3ZCQ8 353 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 Q499Y3 187 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 GPR107Q5VW38 600 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 RGS7BPQ6MZT1 257 aaPredicted RBP6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CLVS1Q8IUQ0 354 aaPredicted RBP6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 C1orf174Q8IYL3 243 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 MS4A15Q8N5U1 240 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 BHLHE23Q8NDY6 225 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 NUP37Q8NFH4 326 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 SEMA6DQ8NFY4 1073 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR56B2PQ8NGI1 322 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR51A4Q8NGJ6 313 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 THRSPQ92748 146 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 SGK3Q96BR1 496 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 YIPF6Q96EC8 236 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 LYZL4Q96KX0 146 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 HS3ST6Q96QI5 342 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CHCHD6Q9BRQ6 235 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 FUNDC2Q9BWH2 189 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 OPA3Q9H6K4 179 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 CA10Q9NS85 328 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 FZR1Q9UM11 496 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 STUB1Q9UNE7 303 aa6.81□□□□□ -1.32
HMGA1P4-201ENST00000428643 HECTD1Q9ULT8 2610 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 COL12A1Q99715 3063 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 DIDO1Q9BTC0 2240 aaKnown RBP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 TRBV5-5A0A0J9YX44 114 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 A6NNC1 897 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 CD300LBA8K4G0 201 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SHISA9B4DS77 424 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF879B4DU55 563 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 H3BSA7 217 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 GABRPO00591 440 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 LMX1BO60663 402 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 OCMP0CE72 109 aaPredicted RBP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 RAC2P15153 192 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SELEP16581 610 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 FAHP16930 419 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 CCL1P22362 96 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 TUBG1P23258 451 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 THBS4P35443 961 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 GLRXP35754 106 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 GNALP38405 381 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 MPV17P39210 176 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 MAGEB1P43366 347 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 MAP2K3P46734 347 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 GSK3AP49840 483 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 FABP6P51161 128 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 KLF3P57682 345 aaPredicted RBP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SELENOVP59797 346 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 RPS11P62280 158 aaKnown RBP eCLIP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 NKX6-1P78426 367 aaPredicted RBP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 ZNF718Q3SXZ3 478 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 ACSM3Q53FZ2 586 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 C22orf42Q6IC83 251 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR2T2Q6IF00 324 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 FBXW12Q6X9E4 464 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 CEACAM19Q7Z692 300 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 OR5AS1Q8N127 324 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 FTMTQ8N4E7 242 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 CCDC54Q8NEL0 328 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SYNPRQ8TBG9 265 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 KLF14Q8TD94 323 aaPredicted RBP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 TMEM171Q8WVE6 324 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 NEUROG1Q92886 237 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 RPL3LQ92901 407 aaKnown RBP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 TMEM106AQ96A25 262 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SPSB4Q96A44 273 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 CMBLQ96DG6 245 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 MARS2Q96GW9 593 aaKnown RBP6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 DERL3Q96Q80 235 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SYT3Q9BQG1 590 aa6.8□□□□□ -1.32
HMGA1P4-201ENST00000428643 SOX7Q9BT81 388 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms