RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SLC7A5P2Q9GIP4 190 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 ZNF768Q9H5H4 540 aaKnown RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 PPP4R1LQ9P1A2 415 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 SHPKQ9UHJ6 478 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 GPR132Q9UNW8 380 aa9.52□□□□□ -0.89
CLIP4-204ENST00000404424 MRPS28Q9Y2Q9 187 aaKnown RBP9.52□□□□□ -0.89
CLIP4-204ENST00000404424 NUDT19A8MXV4 375 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 ABCD4O14678 606 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 NUPL2O15504 423 aaKnown RBP9.51□□□□□ -0.89
CLIP4-204ENST00000404424 HEXBP07686 556 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 HIST1H1DP16402 221 aaKnown RBP9.51□□□□□ -0.89
CLIP4-204ENST00000404424 SERPINF1P36955 418 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 GABREP78334 506 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 RABEPKQ7Z6M1 372 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 CLRN3Q8NCR9 226 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 OR5L2Q8NGL0 311 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 MARCH1Q8TCQ1 289 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 RAB3CQ96E17 227 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 TMEM41AQ96HV5 264 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 FN3KRPQ9HA64 309 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 SLC22A11Q9NSA0 550 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 KLRF1Q9NZS2 232 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 PCDHB10Q9UN67 800 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 POLR1DQ9Y2S0 133 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 LHFPL6Q9Y693 200 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 IGLV3-32A0A0A0MS00 114 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 CDC14BO60729 498 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 PGA4P0DJD7 388 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 PGA3P0DJD8 388 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 PGAM2P15259 253 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 CCL1P22362 96 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 MYBPHQ13203 477 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 EIF3IQ13347 325 aaKnown RBP9.51□□□□□ -0.89
CLIP4-204ENST00000404424 MICBQ29980 383 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 ABHD12BQ7Z5M8 362 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-204ENST00000404424 OR5AS1Q8N127 324 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 SLC30A7Q8NEW0 376 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 OR56B1Q8NGI3 324 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 OCSTAMPQ9BR26 566 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 NICN1Q9BSH3 213 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 TMEM59Q9BXS4 323 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 DUSP15Q9H1R2 295 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-204ENST00000404424 SEC61A2Q9H9S3 476 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 RAB18Q9NP72 206 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 CSAG2Q9Y5P2 127 aa9.51□□□□□ -0.89
CLIP4-204ENST00000404424 C13orf42A0A1B0GVH6 325 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 EFNA2O43921 213 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 ATG12O94817 140 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 SFT2D2O95562 160 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 MPIG6BO95866 241 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 SRFP11831 508 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 PLPPR5Q32ZL2 321 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 PDSS1Q5T2R2 415 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 PTCRAQ6ISU1 281 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 SLC25A47Q6Q0C1 308 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 DOK3Q7L591 496 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 BAP18Q8IXM2 172 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 GTPBP8Q8N3Z3 284 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 OR1S2Q8NGQ3 325 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 OR6X1Q8NH79 312 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 THAP3Q8WTV1 239 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 RNF141Q8WVD5 230 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 DCUN1D4Q92564 292 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 C1orf147Q96MC9 270 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 NUDT22Q9BRQ3 303 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 URM1Q9BTM9 101 aaKnown RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 ZNF416Q9BWM5 594 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 PCDHB16Q9NRJ7 776 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 EXPH5Q8NEV8 1989 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 RANBP2P49792 3224 aaKnown RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 A0A0A6YYD4 124 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 TOX3O15405 576 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 ABOP16442 354 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 BCKDHBP21953 392 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 FPR2P25090 351 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 P2RY4P51582 365 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 COL19A1Q14993 1142 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 KCNMB1Q16558 191 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 PABPC1L2AQ5JQF8 200 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 PLAC9Q5JTB6 97 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 UNQ6126/PRO20091Q6UXV3 157 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 PEG10Q86TG7 708 aaKnown RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 COMMD2Q86X83 199 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 OR8B12Q8NGG6 310 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 POC1BQ8TC44 478 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 NARS2Q96I59 477 aaKnown RBP9.5□□□□□ -0.89
CLIP4-204ENST00000404424 RNF126Q9BV68 326 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 C5orf66Q9H5L9 145 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 TMEM100Q9NV29 134 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 GHRLQ9UBU3 117 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 FER1L5A0AVI2 2057 aa9.5□□□□□ -0.89
CLIP4-204ENST00000404424 TRBV11-1A0A0K0K1C0 115 aa9.49□□□□□ -0.89
CLIP4-204ENST00000404424 TMEM218A2RU14 115 aa9.49□□□□□ -0.89
CLIP4-204ENST00000404424 SHISA8B8ZZ34 492 aa9.49□□□□□ -0.89
CLIP4-204ENST00000404424 SOCS1O15524 211 aa9.49□□□□□ -0.89
CLIP4-204ENST00000404424 CD79AP11912 226 aa9.49□□□□□ -0.89
CLIP4-204ENST00000404424 LYL1P12980 280 aa9.49□□□□□ -0.89
CLIP4-204ENST00000404424 FKBP2P26885 142 aaKnown RBP9.49□□□□□ -0.89
CLIP4-204ENST00000404424 TMEM50BP56557 158 aa9.49□□□□□ -0.89
CLIP4-204ENST00000404424 ZNF121P58317 390 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms