RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 HTR5AP47898 357 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 RIDAP52758 137 aaKnown RBP11.69□□□□□ -0.54
SEC13-205ENST00000397101 HILS1P60008 231 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 PSG4Q00888 419 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 GALK2Q01415 458 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 EGR3Q06889 387 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 MED22Q15528 200 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 NEDD8Q15843 81 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 PCK2Q16822 640 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 CCDC92Q53HC0 331 aaPredicted RBP11.69□□□□□ -0.54
SEC13-205ENST00000397101 PABPC1L2AQ5JQF8 200 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 ZNF774Q6NX45 483 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 SSX6Q7RTT6 188 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 MDP1Q86V88 176 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 GLCCI1Q86VQ1 547 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 SPARTQ8N0X7 666 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
SEC13-205ENST00000397101 GATAD2BQ8WXI9 593 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 MAP6Q96JE9 813 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 C4orf36Q96KX1 117 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 JMJD8Q96S16 334 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 AMELYQ99218 206 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 DOK1Q99704 481 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 CDCA4Q9BXL8 241 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 ELOVL3Q9HB03 270 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 SLCO1C1Q9NYB5 712 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 SCOCQ9UIL1 159 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 GTF2A1LQ9UNN4 478 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
SEC13-205ENST00000397101 N6AMT1Q9Y5N5 214 aa11.69□□□□□ -0.54
SEC13-205ENST00000397101 PRKDCP78527 4128 aaKnown RBP11.69□□□□□ -0.54
SEC13-205ENST00000397101 ARPC4-TTLL3A0A0A6YYG9 625 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 PTHP01270 115 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 IGLV1-44P01699 117 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 MT-ND5P03915 603 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 ADRA2AP08913 450 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 LIMS3P0CW19 117 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 LIMS4P0CW20 117 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 HSMCR30P0CW71 290 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 CCNOP22674 350 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 APLNRP35414 380 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 GBX2P52951 348 aaPredicted RBP11.68□□□□□ -0.54
SEC13-205ENST00000397101 OR12D2P58182 307 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 GRB2P62993 217 aaKnown RBP11.68□□□□□ -0.54
SEC13-205ENST00000397101 NAAAQ02083 359 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 RAB39AQ14964 217 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 PDLIM3Q53GG5 364 aaPredicted RBP11.68□□□□□ -0.54
SEC13-205ENST00000397101 KCTD8Q6ZWB6 473 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 KCTD20Q7Z5Y7 419 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 ZNF679Q8IYX0 411 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 ZNF283Q8N7M2 679 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 NANOGP1Q8N7R0 232 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 OR1F12Q8NHA8 337 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 ST7LQ8TDW4 575 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 UBASH3BQ8TF42 649 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 SPTSSAQ969W0 71 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 OR8B4Q96RC9 309 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 ATF6BQ99941 703 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 MRPS26Q9BYN8 205 aaKnown RBP11.68□□□□□ -0.54
SEC13-205ENST00000397101 HDHD2Q9H0R4 259 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 WNT5BQ9H1J7 359 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 PCDHB10Q9UN67 800 aa11.68□□□□□ -0.54
SEC13-205ENST00000397101 PKD1L1Q8TDX9 2849 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 TMEM129A0AVI4 362 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 F5H5K5 113 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 ZNF254O75437 659 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 IGKV3-15P01624 115 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 HTR1AP08908 422 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 MMP7P09237 267 aaPredicted RBP11.67□□□□□ -0.54
SEC13-205ENST00000397101 CBR1P16152 277 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 PSMB9P28065 219 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 PSMB10P40306 273 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 GDI2P50395 445 aaKnown RBP11.67□□□□□ -0.54
SEC13-205ENST00000397101 PRKXP51817 358 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 WNT4P56705 351 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 EMX1Q04741 257 aaPredicted RBP11.67□□□□□ -0.54
SEC13-205ENST00000397101 ECH1Q13011 328 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 CDONQ4KMG0 1287 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 RNLSQ5VYX0 342 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 VASH1Q7L8A9 365 aaPredicted RBP11.67□□□□□ -0.54
SEC13-205ENST00000397101 KLBQ86Z14 1044 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 OR52N1Q8NH53 320 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 RNF133Q8WVZ7 376 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 RORBQ92753 470 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 TMEM186Q96B77 213 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 ISG20L2Q9H9L3 353 aaKnown RBP11.67□□□□□ -0.54
SEC13-205ENST00000397101 BRD7Q9NPI1 651 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 ACOT13Q9NPJ3 140 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 ZNF224Q9NZL3 707 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 FBXL3Q9UKT7 428 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 GRIP1Q9Y3R0 1128 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 LRP12Q9Y561 859 aa11.67□□□□□ -0.54
SEC13-205ENST00000397101 ZNF503-AS2A6NEH8 195 aa11.66□□□□□ -0.54
SEC13-205ENST00000397101 OR6C6A6NF89 314 aa11.66□□□□□ -0.54
SEC13-205ENST00000397101 SULT1C4O75897 302 aa11.66□□□□□ -0.54
SEC13-205ENST00000397101 CLPTM1O96005 669 aa11.66□□□□□ -0.54
SEC13-205ENST00000397101 APOC1P02654 83 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms