RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 HES5Q5TA89 166 aa23.24■■□□□ 1.31
MSX1-201ENST00000382723 COLCA1Q6ZS62 124 aa23.24■■□□□ 1.31
MSX1-201ENST00000382723 RTTNQ86VV8 2226 aa23.24■■□□□ 1.31
MSX1-201ENST00000382723 CCL21O00585 134 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 ZNF92Q03936 586 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 SPOCK1Q08629 439 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 TBC1D28Q2M2D7 210 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 OR51B6Q9H340 312 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 V9GYS6 101 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 MTRF1O75570 445 aaKnown RBP23.23■■□□□ 1.31
MSX1-201ENST00000382723 ATF1P18846 271 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 CFL1P23528 166 aaKnown RBP23.23■■□□□ 1.31
MSX1-201ENST00000382723 PPP3R1P63098 170 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 ALKBH2Q6NS38 261 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 LAX1Q8IWV1 398 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 OR5D14Q8NGL3 314 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 ABCB9Q9NP78 766 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 CMAHPQ9Y471 501 aa23.23■■□□□ 1.31
MSX1-201ENST00000382723 A0A0B4J203 849 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 NGFP01138 241 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 PSMB1P20618 241 aaKnown RBP23.22■■□□□ 1.31
MSX1-201ENST00000382723 THBS2P35442 1172 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 WNT5AP41221 380 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 OR13C9Q8NGT0 318 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 APOBEC3DQ96AK3 386 aaPredicted RBP23.22■■□□□ 1.31
MSX1-201ENST00000382723 ZCCHC4Q9H5U6 513 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 PIGLQ9Y2B2 252 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 AMDHD2Q9Y303 409 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 SHANK1Q9Y566 2161 aa23.22■■□□□ 1.31
MSX1-201ENST00000382723 IFITM5A6NNB3 132 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 XRCC2O43543 280 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 INHBBP09529 407 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 BMP4P12644 408 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 FAHP16930 419 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 LINC00299Q6ZSB3 139 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 ZNF101Q8IZC7 436 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 CEP19Q96LK0 163 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 NKX3-1Q99801 234 aaPredicted RBP23.21■■□□□ 1.31
MSX1-201ENST00000382723 RGCCQ9H4X1 137 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 OBP2BQ9NPH6 170 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 PAHP00439 452 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 IGKV3-15P01624 115 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 DDOSTP39656 456 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 MZT2AQ6P582 158 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 ZFAND2BQ8WV99 257 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 AKAP1Q92667 903 aaKnown RBP eCLIP23.21■■□□□ 1.31
MSX1-201ENST00000382723 ACTR6Q9GZN1 396 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 CDH20Q9HBT6 801 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 AKIP1Q9NQ31 210 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 STARD10Q9Y365 291 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 SLC25A15Q9Y619 301 aa23.21■■□□□ 1.31
MSX1-201ENST00000382723 DDI2Q5TDH0 399 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 SEMA6DQ8NFY4 1073 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 OR1M1Q8NGA1 313 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 ACOT12Q8WYK0 555 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 ZNF391Q9UJN7 358 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 AIPO00170 330 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 HPGDSO60760 199 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 SNRPBP14678 240 aaKnown RBP23.2■■□□□ 1.3
MSX1-201ENST00000382723 ACKR3P25106 362 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 TNFSF8P32971 234 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 PSMD7P51665 324 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 MALLQ13021 153 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 TIMM23BQ5SRD1 257 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 KCTD12Q96CX2 325 aaKnown RBP23.2■■□□□ 1.3
MSX1-201ENST00000382723 MIXL1Q9H2W2 232 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 PLGRKTQ9HBL7 147 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 PTTG3PQ9NZH4 202 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 JKAMPQ9P055 326 aa23.2■■□□□ 1.3
MSX1-201ENST00000382723 LOC390937A0A1W2PQ73 354 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 RAB3AP20336 220 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 GSK3AP49840 483 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 CLDN12P56749 244 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 FAM3AP98173 230 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 DMRTC1Q5HYR2 192 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 Q6ZSR3 168 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 CCDC54Q8NEL0 328 aa23.19■■□□□ 1.3
MSX1-201ENST00000382723 TRMT10AQ8TBZ6 339 aaKnown RBP23.19■■□□□ 1.3
MSX1-201ENST00000382723 hCG_38984A0A1B0GV85 526 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 RFPL4BQ6ZWI9 263 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 PGAP1Q75T13 922 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 FJX1Q86VR8 437 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 ZNF671Q8TAW3 534 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 S100ZQ8WXG8 99 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 SPSB4Q96A44 273 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 POFUT1Q9H488 388 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 HMG20AQ9NP66 347 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 ELOVL5Q9NYP7 299 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 CGGBP1Q9UFW8 167 aaPredicted RBP23.18■■□□□ 1.3
MSX1-201ENST00000382723 CLDN25C9JDP6 229 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 BDKRB2P30411 391 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 MAP2K3P46734 347 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 TNK1Q13470 666 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 GK2Q14410 553 aaPredicted RBP23.18■■□□□ 1.3
MSX1-201ENST00000382723 HLXQ14774 488 aaPredicted RBP23.18■■□□□ 1.3
MSX1-201ENST00000382723 MFSD4AQ8N468 514 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 STEAP2Q8NFT2 490 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 MUCL1Q96DR8 90 aa23.18■■□□□ 1.3
MSX1-201ENST00000382723 EIF3KQ9UBQ5 218 aaKnown RBP23.18■■□□□ 1.3
MSX1-201ENST00000382723 SULT1B1O43704 296 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms