RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PLEKHA1Q9HB21 404 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 V9GYS6 101 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PCNX1Q96RV3 2341 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PRR14LQ5THK1 2151 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 OR5H1A6NKK0 313 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 INHBBP09529 407 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CBR1P16152 277 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ATF1P18846 271 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CFL1P23528 166 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 THBS2P35442 1172 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PRSS12P56730 875 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 FAM27E3Q08E93 113 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MRPL49Q13405 166 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ST3GAL2Q16842 350 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 TBC1D28Q2M2D7 210 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 LINC00299Q6ZSB3 139 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 OR51A2Q8NGJ7 313 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 S100PBPQ96BU1 408 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 POLEQ07864 2286 aa12.77□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CCL21O00585 134 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 XRCC2O43543 280 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MTRF1O75570 445 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 NGFP01138 241 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 BMP4P12644 408 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PSMB1P20618 241 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 DDOSTP39656 456 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF92Q03936 586 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SPOCK1Q08629 439 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 HES5Q5TA89 166 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 Q6ZSR3 168 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 LAX1Q8IWV1 398 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR5D14Q8NGL3 314 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 APOBEC3DQ96AK3 386 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ABCB9Q9NP78 766 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OBP2BQ9NPH6 170 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 AMDHD2Q9Y303 409 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
CDK5RAP3-201ENST00000338399 A0A0B4J203 849 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 IFITM5A6NNB3 132 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 IGKV3-15P01624 115 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 WNT5AP41221 380 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PPP3R1P63098 170 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MZT2AQ6P582 158 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF101Q8IZC7 436 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR13C9Q8NGT0 318 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 KCTD12Q96CX2 325 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR51B6Q9H340 312 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 RGCCQ9H4X1 137 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 AKIP1Q9NQ31 210 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 JKAMPQ9P055 326 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PIGLQ9Y2B2 252 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 STARD10Q9Y365 291 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SLC25A15Q9Y619 301 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 LOC390937A0A1W2PQ73 354 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PAHP00439 452 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAHP16930 419 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ACKR3P25106 362 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TNFSF8P32971 234 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PSMD7P51665 324 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TIMM23BQ5SRD1 257 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 DDI2Q5TDH0 399 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CCDC54Q8NEL0 328 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 OR1M1Q8NGA1 313 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 S100ZQ8WXG8 99 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ACOT12Q8WYK0 555 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 AKAP1Q92667 903 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CEP19Q96LK0 163 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ACTR6Q9GZN1 396 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MIXL1Q9H2W2 232 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CDH20Q9HBT6 801 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF391Q9UJN7 358 aa12.76□□□□□ -0.37
CDK5RAP3-201ENST00000338399 hCG_38984A0A1B0GV85 526 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 AIPO00170 330 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 HPGDSO60760 199 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SNRPBP14678 240 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 RAB3AP20336 220 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 GSK3AP49840 483 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CLDN12P56749 244 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 FAM3AP98173 230 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 TNK1Q13470 666 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ALKBH2Q6NS38 261 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PGAP1Q75T13 922 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 SPSB4Q96A44 273 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 NKX3-1Q99801 234 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 POFUT1Q9H488 388 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ELOVL5Q9NYP7 299 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 PTTG3PQ9NZH4 202 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CACNA1BQ00975 2339 aa12.75□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MEGF11A6BM72 1044 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 CLDN25C9JDP6 229 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 BDKRB2P30411 391 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 THBS4P35443 961 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MAP2K3P46734 347 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 RIPPLY1Q0D2K3 151 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 MALLQ13021 153 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 GK2Q14410 553 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
CDK5RAP3-201ENST00000338399 ZNF529Q6P280 563 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms