RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SLC38A6Q8IZM9 456 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 GJC3Q8NFK1 279 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 FAM213BQ8TBF2 198 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 CYSLTR2Q9NS75 346 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 RNF150Q9ULK6 438 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 OR5H14A6NHG9 310 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 PLPP2O43688 288 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 NME2P1O60361 137 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 PRAF2O60831 178 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 RAC2P15153 192 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 S100A11P31949 105 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 EIF2S3P41091 472 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 ACAA2P42765 397 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 IDH3GP51553 393 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 RAP2BP61225 183 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 CNN3Q15417 329 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 PRSS27Q9BQR3 290 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 R4GMQ9 66 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 URGCP-MRPS24S4R325 110 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 H3BP45 60 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 K7EPK0 472 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SIRPB1O00241 398 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 C1QBP02746 253 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 OR4E1P0C645 316 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 NAGAP17050 411 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 GALNSP34059 522 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SLC37A1P57057 533 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 IAH1Q2TAA2 248 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 GAB4Q2WGN9 574 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SMUG1Q53HV7 270 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 AADACL3Q5VUY0 350 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 MAML2Q8IZL2 1156 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 FAM71E2Q8N5Q1 922 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF709Q8N972 641 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SEMA6DQ8NFY4 1073 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 C2CD4CQ8TF44 421 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 TMED6Q8WW62 240 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 CNTNAP3BQ96NU0 1288 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 TRIB1Q96RU8 372 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 NICN1Q9BSH3 213 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 TAS2R5Q9NYW4 299 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 RAB22AQ9UL26 194 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 EXOGQ9Y2C4 368 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 PUS1Q9Y606 427 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBR1-201ENST00000290650 YLPM1P49750 1951 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 LOC102725191A0A1B0GVB3 256 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SLC22A23A1A5C7 686 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF587BE7ETH6 402 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZIC2O95409 532 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 TBX6O95947 436 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF250P15622 560 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 S100A2P29034 98 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ATP1B3P54709 279 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 CLPPQ16740 277 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 ESCO2Q56NI9 601 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF468Q5VIY5 522 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF770Q6IQ21 691 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF774Q6NX45 483 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 MKXQ8IYA7 352 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 DEFB108BQ8NET1 73 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 OR56B1Q8NGI3 324 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 OR6M1Q8NGM8 313 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ARHGAP5-AS1Q96IT6 56 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 AMELYQ99218 206 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 CDX2Q99626 313 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 C19orf43Q9BQ61 176 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 CNTD2Q9H8S5 307 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 MRPL22Q9NWU5 206 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF223Q9UK11 482 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 FOXJ3Q9UPW0 622 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SHANK1Q9Y566 2161 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 WNK2Q9Y3S1 2297 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 THY1P04216 161 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ANKRD34CP0C6C1 535 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SPEM2Q0P670 501 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZNF169Q14929 603 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 FAM189A2Q15884 450 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 C6orf201Q7Z4U5 140 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SPEM1Q8N4L4 309 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SP7Q8TDD2 431 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 EMG1Q92979 244 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 MCHR2Q969V1 340 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 CHST6Q9GZX3 395 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZCCHC4Q9H5U6 513 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 OPA3Q9H6K4 179 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ENY2Q9NPA8 101 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ZMAT5Q9UDW3 170 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 MRPS18BQ9Y676 258 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 FTCDNL1E5RQL4 147 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 PLPP3O14495 311 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 NXPH2O95156 264 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 TPT1P13693 172 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 CD46P15529 392 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 PPP3CBP16298 524 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 HAAOP46952 286 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 PNLIPRP2P54317 469 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 EDDM3BP56851 147 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 C21orf58P58505 322 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 PPIAP62937 165 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms