RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ITGB2P05107 769 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 SUMO1P63165 101 aaKnown RBP11.73□□□□□ -0.53
TMEM260-201ENST00000261556 DHODHQ02127 395 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 TAF9Q16594 264 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 C16orf54Q6UWD8 224 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 FAM117AQ9C073 453 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 WWTR1Q9GZV5 400 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 EPHX3Q9H6B9 360 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 PELI2Q9HAT8 420 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 MTFP1Q9UDX5 166 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 NCOR1O75376 2440 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 OR6C6A6NF89 314 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 NPIPA3F8WFD2 350 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 G3V3Q6 166 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 C1orf105O95561 183 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 PGCP20142 388 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 EMP2P54851 167 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 TMEM183BQ1AE95 376 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 MDGA2Q7Z553 956 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 OR13C8Q8NGS7 320 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 CHST11Q9NPF2 352 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF701Q9NV72 531 aaPredicted RBP11.73□□□□□ -0.53
TMEM260-201ENST00000261556 SHANK3Q9BYB0 1731 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 TRAV14DV4A0A0A6YYC5 116 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 H0YL77 283 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 SPOCK1Q08629 439 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 ARHGAP19Q14CB8 494 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 HIST3H2BBQ8N257 126 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 ARIH2OSQ8N7S6 290 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 OR2G3Q8NGZ4 309 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF426Q9BUY5 554 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 CACNA1EQ15878 2313 aa11.73□□□□□ -0.53
TMEM260-201ENST00000261556 CLDN34H7C241 214 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 XRCC2O43543 280 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 SEMG1P04279 462 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 OR5G3P0C626 314 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 IMPA1P29218 277 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 TACR3P29371 465 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 FABP6P51161 128 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 TDGF1P3P51864 188 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 EFNB1P98172 346 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF345Q14585 488 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ENTPD8Q5MY95 495 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF620Q6ZNG0 422 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 DCXRQ7Z4W1 244 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 CMTM1Q8IZ96 169 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 VN1R2Q8NFZ6 395 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 MIB2Q96AX9 1013 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ST6GALNAC5Q9BVH7 336 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 C1QTNF2Q9BXJ5 285 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 SLC7A11Q9UPY5 501 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 WSB1Q9Y6I7 421 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 SURF4O15260 269 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 KLK8O60259 260 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 GPR137BO60478 399 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 MSX1P28360 303 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 MMP16P51512 607 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 PARM1Q6UWI2 310 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 APCDD1LQ8NCL9 501 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 SLC26A10Q8NG04 563 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ROBO4Q8WZ75 1007 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 CDS1Q92903 461 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 MTHFD2LQ9H903 347 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ASIC5Q9NY37 505 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 CLEC4EQ9ULY5 219 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 CRHP06850 196 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 DPP4P27487 766 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 HMGA2P52926 109 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 CD200R1LQ6Q8B3 271 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF740Q8NDX6 193 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 FAM3DQ96BQ1 224 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 GPA33Q99795 319 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 SRPK3Q9UPE1 567 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 A0A0J9YY10 115 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 GLSO94925 669 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-201ENST00000261556 IGHV2-5P01817 119 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 IRF2P14316 349 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 RPS23P62266 143 aaKnown RBP11.72□□□□□ -0.53
TMEM260-201ENST00000261556 HIST1H3AP68431 136 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 TIAL1Q01085 375 aaKnown RBP eCLIP11.72□□□□□ -0.53
TMEM260-201ENST00000261556 PLP2Q04941 152 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 IKZF1Q13422 519 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 CPEB2Q7Z5Q1 589 aaKnown RBP11.72□□□□□ -0.53
TMEM260-201ENST00000261556 LILRA3Q8N6C8 439 aaPredicted RBP11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ZNF738Q8NE65 137 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 GPR148Q8TDV2 347 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 PGAM5Q96HS1 289 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 FBXL17Q9UF56 701 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 FUT9Q9Y231 359 aa11.72□□□□□ -0.53
TMEM260-201ENST00000261556 ATAD5Q96QE3 1844 aa11.71□□□□□ -0.53
TMEM260-201ENST00000261556 VSTM2BA6NLU5 285 aa11.71□□□□□ -0.53
TMEM260-201ENST00000261556 FHITP49789 147 aa11.71□□□□□ -0.53
TMEM260-201ENST00000261556 ENDOGQ14249 297 aaKnown RBP11.71□□□□□ -0.53
TMEM260-201ENST00000261556 TESK1Q15569 626 aa11.71□□□□□ -0.53
TMEM260-201ENST00000261556 CARD17Q5XLA6 110 aa11.71□□□□□ -0.53
TMEM260-201ENST00000261556 LEG1Q6P5S2 330 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms