RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 CCNKO75909 580 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 FARS2O95363 451 aaKnown RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 CSF1P09603 554 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ARSBP15848 533 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF24P17028 368 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ALDH3B1P43353 468 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 LHX2P50458 406 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 TDGF1P3P51864 188 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 TPTEP56180 551 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 CLDN15P56746 228 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 GALK2Q01415 458 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 MFGE8Q08431 387 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ENDOGQ14249 297 aaKnown RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 WIPI1Q5MNZ9 446 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF324BQ6AW86 544 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 OR2W3Q7Z3T1 314 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ABHD12BQ7Z5M8 362 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 WDFY1Q8IWB7 410 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 OR1M1Q8NGA1 313 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 OR51A4Q8NGJ6 313 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 HPS1Q92902 700 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 NABP1Q96AH0 204 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 FGGYQ96C11 551 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 CPNE2Q96FN4 548 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ZFP3Q96NJ6 502 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 SIGLEC12Q96PQ1 595 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 NEDD4LQ96PU5 975 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF416Q9BWM5 594 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 SRXN1Q9BYN0 137 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 METTL17Q9H7H0 456 aaPredicted RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 BCO1Q9HAY6 547 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 MTFP1Q9UDX5 166 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ITGB1BP2Q9UKP3 347 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 FBXL3Q9UKT7 428 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 GTF2A1LQ9UNN4 478 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 MRPS7Q9Y2R9 242 aaKnown RBP9.36□□□□□ -0.91
CDCA3-201ENST00000229265 NCKAP5O14513 1909 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 ITPR2Q14571 2701 aa9.36□□□□□ -0.91
CDCA3-201ENST00000229265 SPTBN1Q01082 2364 aaKnown RBP9.35□□□□□ -0.91
CDCA3-201ENST00000229265 CTAG2O75638 210 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 TCRBP04435 133 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 YES1P07947 543 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 MELTFP08582 738 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 ITGA5P08648 1049 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 PRSS3P35030 304 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 THBS4P35443 961 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 GNALP38405 381 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 EIF1AXP47813 144 aaKnown RBP9.35□□□□□ -0.91
CDCA3-201ENST00000229265 MECP2P51608 486 aaKnown RBP9.35□□□□□ -0.91
CDCA3-201ENST00000229265 KLF9Q13886 244 aaPredicted RBP9.35□□□□□ -0.91
CDCA3-201ENST00000229265 RAB35Q15286 201 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 KRTAP27-1Q3LI81 207 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 DOPEY1Q5JWR5 2465 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 GLYATL3Q5SZD4 288 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 CARD17Q5XLA6 110 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 CORO6Q6QEF8 472 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 CFAP77Q6ZQR2 320 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 BTN2A1Q7KYR7 527 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 CHMP1BQ7LBR1 199 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 KRT74Q7RTS7 529 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 LIX1LQ8IVB5 337 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 RP1L1Q8IWN7 2480 aaPredicted RBP9.35□□□□□ -0.91
CDCA3-201ENST00000229265 FAM109AQ8N4B1 249 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF283Q8N7M2 679 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 GALNT11Q8NCW6 608 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 OR51D1Q8NGF3 324 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 OR10AC1Q8NH08 325 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 OR56B4Q8NH76 319 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 FOXN4Q96NZ1 517 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 TECTBQ96PL2 329 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 UCN2Q96RP3 112 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 CACNG6Q9BXT2 260 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 TTTY12Q9BZ98 90 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 EXO5Q9H790 373 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 TMEM38BQ9NVV0 291 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 NLKQ9UBE8 527 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 V9GYS6 101 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 UNC79Q9P2D8 2635 aa9.35□□□□□ -0.91
CDCA3-201ENST00000229265 OR6C6A6NF89 314 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 WIPF3A6NGB9 483 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 GGT3PA6NGU5 568 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 G3V3Y1 287 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 P2RY10O00398 339 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 RER1O15258 196 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 PRF1P14222 555 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF20P17024 532 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 PSMB1P20618 241 aaKnown RBP9.34□□□□□ -0.91
CDCA3-201ENST00000229265 CDK2P24941 298 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 CDAP32320 146 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 GDNFP39905 211 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 MAGEB1P43366 347 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 CX3CR1P49238 355 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 POU3F4P49335 361 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 SELENOPP49908 381 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 CLDN18P56856 261 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF121P58317 390 aaPredicted RBP9.34□□□□□ -0.91
CDCA3-201ENST00000229265 TAS2R20P59543 309 aa9.34□□□□□ -0.91
CDCA3-201ENST00000229265 ACTBP60709 375 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms