RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ZNF391Q9UJN7 358 aa19.61■□□□□ 0.73
IRF3-228ENST00000601291 A0A1W2PPK0 400 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 C16orf97H3BN30 126 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 CASKO14936 926 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 IGKV3-15P01624 115 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 CCL2P13500 99 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 SDC2P34741 201 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 ASCL1P50553 236 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 DGUOKQ16854 277 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 SNAI3Q3KNW1 292 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 PRR7Q8TB68 274 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 RGCCQ9H4X1 137 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 SLC25A15Q9Y619 301 aa19.6■□□□□ 0.73
IRF3-228ENST00000601291 AGFG2O95081 481 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 CCL1P22362 96 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 SOX6P35712 828 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 MAGEB1P43366 347 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 FAM169BQ8N8A8 192 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 CCDC54Q8NEL0 328 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 APOBEC3DQ96AK3 386 aaPredicted RBP19.59■□□□□ 0.73
IRF3-228ENST00000601291 CCDC120Q96HB5 630 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 SLITRK2Q9H156 845 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 OR10A4Q9H209 315 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 PPIL3Q9H2H8 161 aaKnown RBP19.59■□□□□ 0.73
IRF3-228ENST00000601291 CDH20Q9HBT6 801 aa19.59■□□□□ 0.73
IRF3-228ENST00000601291 CCDC59Q9P031 241 aaKnown RBP19.59■□□□□ 0.73
IRF3-228ENST00000601291 TRBV5-7A0A0A0MS05 114 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 TRAV1-2A0A0B4J238 106 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 A0A1B0GTI1 187 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 XRCC2O43543 280 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 IGLV3-1P01715 115 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 ANOS1P23352 680 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 RPS19P39019 145 aaKnown RBP19.58■□□□□ 0.73
IRF3-228ENST00000601291 ADORA2A-AS1P86434 159 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 MXD1Q05195 221 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 PPA1Q15181 289 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 COLCA1Q6ZS62 124 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 TPRA1Q86W33 373 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 FAM71F1Q96KD3 344 aaPredicted RBP19.58■□□□□ 0.73
IRF3-228ENST00000601291 TCF7L1Q9HCS4 588 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 SNTG1Q9NSN8 517 aa19.58■□□□□ 0.73
IRF3-228ENST00000601291 PIN1P1O15428 100 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 MTRF1O75570 445 aaKnown RBP19.57■□□□□ 0.72
IRF3-228ENST00000601291 CELA3BP08861 270 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 GNLYP22749 145 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 SSX8Q7RTT4 187 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 REEP6Q96HR9 211 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 C1QTNF6Q9BXI9 259 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 TPK1Q9H3S4 243 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 PLEKHA1Q9HB21 404 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 CRNNQ9UBG3 495 aaPredicted RBP19.57■□□□□ 0.72
IRF3-228ENST00000601291 CKLFQ9UBR5 152 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 ERRFI1Q9UJM3 462 aaPredicted RBP19.57■□□□□ 0.72
IRF3-228ENST00000601291 NBEAQ8NFP9 2946 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 C5orf63A6NC05 138 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 SRMP19623 302 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 C4orf17Q53FE4 359 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 AKAP1Q92667 903 aaKnown RBP eCLIP19.57■□□□□ 0.72
IRF3-228ENST00000601291 SGK3Q96BR1 496 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 LRRC46Q96FV0 321 aa19.57■□□□□ 0.72
IRF3-228ENST00000601291 ZNF275Q9NSD4 429 aaPredicted RBP19.57■□□□□ 0.72
IRF3-228ENST00000601291 EIF3KQ9UBQ5 218 aaKnown RBP19.57■□□□□ 0.72
IRF3-228ENST00000601291 SHISA3A0PJX4 238 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 B8ZZF3 427 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 J3QW42 95 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 DHRS3O75911 302 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 IGLV1-44P01699 117 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 ZNF20P17024 532 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 CFL1P23528 166 aaKnown RBP19.56■□□□□ 0.72
IRF3-228ENST00000601291 CCKARP32238 428 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 RORCP51449 518 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 MALLQ13021 153 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 TAB1Q15750 504 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 IGFBP7Q16270 282 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 GLYATL3Q5SZD4 288 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 MYPOPQ86VE0 399 aaPredicted RBP19.56■□□□□ 0.72
IRF3-228ENST00000601291 PLPP7Q8NBV4 271 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 SLC25A46Q96AG3 418 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 LYZL4Q96KX0 146 aa19.56■□□□□ 0.72
IRF3-228ENST00000601291 BBC3Q96PG8 261 aaPredicted RBP19.56■□□□□ 0.72
IRF3-228ENST00000601291 FAM90A27PA6NNH2 459 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 PDCD5O14737 125 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 CLEC2LP0C7M8 214 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 FSTP19883 344 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 UQCRFS1P47985 274 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 C3orf36Q3SXR2 165 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 OR2AE1Q8NHA4 323 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 ORAI1Q96D31 301 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 TBCCD1Q9NVR7 557 aa19.55■□□□□ 0.72
IRF3-228ENST00000601291 LOC390937A0A1W2PQ73 354 aa19.54■□□□□ 0.72
IRF3-228ENST00000601291 PPP3CBP16298 524 aa19.54■□□□□ 0.72
IRF3-228ENST00000601291 RAB3BP20337 219 aa19.54■□□□□ 0.72
IRF3-228ENST00000601291 CACNA1BQ00975 2339 aa19.54■□□□□ 0.72
IRF3-228ENST00000601291 HNRNPA0Q13151 305 aaKnown RBP19.54■□□□□ 0.72
IRF3-228ENST00000601291 FBXL19-AS1Q494R0 122 aa19.54■□□□□ 0.72
IRF3-228ENST00000601291 SERPINA12Q8IW75 414 aa19.54■□□□□ 0.72
IRF3-228ENST00000601291 RP1L1Q8IWN7 2480 aaPredicted RBP19.54■□□□□ 0.72
IRF3-228ENST00000601291 PAQR4Q8N4S7 273 aaPredicted RBP19.54■□□□□ 0.72
IRF3-228ENST00000601291 PARP16Q8N5Y8 322 aa19.54■□□□□ 0.72
IRF3-228ENST00000601291 OR5L1Q8NGL2 311 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms