RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 GPR3P46089 330 aa15.37■□□□□ 0.05
SMARCA4-215ENST00000590574 SKP2Q13309 424 aa15.37■□□□□ 0.05
SMARCA4-215ENST00000590574 MPPED2Q15777 294 aa15.37■□□□□ 0.05
SMARCA4-215ENST00000590574 RABEPKQ7Z6M1 372 aa15.37■□□□□ 0.05
SMARCA4-215ENST00000590574 SECTM1Q8WVN6 248 aa15.37■□□□□ 0.05
SMARCA4-215ENST00000590574 LRFN1Q9P244 771 aa15.37■□□□□ 0.05
SMARCA4-215ENST00000590574 PIGBOS1A0A0B4J2F0 54 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 A0A1W2PQF6 199 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 PLPP3O14495 311 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 NME1P15531 152 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 ENPP1P22413 925 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 CARD18P57730 90 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 PAN3Q58A45 887 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 DTWD2Q8NBA8 298 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 OXGR1Q96P68 337 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 CD96P40200 585 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 ISXQ2M1V0 245 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 ABHD17BQ5VST6 288 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 OR4D6Q8NGJ1 314 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 PILRAQ9UKJ1 303 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 A6NLC8 198 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 LMO7DNF2Z398 122 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 TRAPPC2LH3BP13 241 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 FUT7Q11130 342 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 CLINT1Q14677 625 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 B3GNTL1Q67FW5 361 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 TMEM88Q6PEY1 159 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 CPEB2Q7Z5Q1 589 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 BATF2Q8N1L9 274 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 OR5L1Q8NGL2 311 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 EDAQ92838 391 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 NMNAT2Q9BZQ4 307 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 KLF15Q9UIH9 416 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 PADI1Q9ULC6 663 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 ZMIZ1Q9ULJ6 1067 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 ANKRD30BLA7E2S9 258 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 NGFRP08138 427 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 EFNB2P52799 333 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 PCK2Q16822 640 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 C16orf47Q6ZP98 133 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 TMPPEQ6ZT21 453 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 MKXQ8IYA7 352 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 ZFP82Q8N141 532 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 TERB2Q8NHR7 220 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 C12orf10Q9HB07 376 aa15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 PUS1Q9Y606 427 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMARCA4-215ENST00000590574 MRPL33O75394 65 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 APLNRP35414 380 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 MAML2Q8IZL2 1156 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 AICDAQ9GZX7 198 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 OIP5O43482 229 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 GSTP1P09211 210 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 GLI4P10075 376 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 CAMK2BQ13554 666 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 NOXO1Q8NFA2 376 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 C1QTNF6Q9BXI9 259 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 SGCEO43556 437 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 GLB1P16278 677 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 CNTD2Q9H8S5 307 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 KCNIP1Q9NZI2 227 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 OPN4Q9UHM6 478 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 IGHV3-15A0A0B4J1V0 119 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 ITGB2P05107 769 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 GUSBP08236 651 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 AGBL5Q8NDL9 886 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 OR6K3Q8NGY3 331 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 ATOH1Q92858 354 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 FLVCR1Q9Y5Y0 555 aa15.35■□□□□ 0.05
SMARCA4-215ENST00000590574 FOLR1P15328 257 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 S100PP25815 95 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 RPL23AP62750 156 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 PDZK1IP1Q13113 114 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 HMGN3Q15651 99 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 LPAL2Q16609 132 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 GVQW1Q8N7I0 195 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 OR52N4Q8NGI2 321 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 PFDN5Q99471 154 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 A0A0B4J293 547 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 TXNL1O43396 289 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 RPS4Y1P22090 263 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 TMEM128Q5BJH2 165 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 OR2W3Q7Z3T1 314 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 ZDHHC22Q8N966 263 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 SUMF1Q8NBK3 374 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 CD300LBA8K4G0 201 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 METTL12A8MUP2 240 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 F10P00742 488 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 CEBPEQ15744 281 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 BPIFCQ8NFQ6 507 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 OR10Z1Q8NGY1 313 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 TTC9Q92623 222 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 M0R135 149 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 SUMO3P55854 103 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 MYBPHQ13203 477 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 IKZF1Q13422 519 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 TMEM71Q6P5X7 295 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 OR51A2Q8NGJ7 313 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 ZNF799Q96GE5 643 aa15.34■□□□□ 0.05
SMARCA4-215ENST00000590574 C9orf170A2RU37 121 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms