RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 MMP24Q9Y5R2 645 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 LYVE1Q9Y5Y7 322 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 COMMD3-BMI1R4GMX3 469 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 V9GYQ6 96 aa3.67□□□□□ -1.82
PPP4R1-209ENST00000578329 IGHV3OR15-7A0A075B7D8 119 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 A0A0U1RQK1 487 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 GMNCA6NCL1 334 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 SRRM5B3KS81 715 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 F5H5K5 113 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 J3QW42 95 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 SNX3O60493 162 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 ENTPD5O75356 428 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TSPAN15O95858 294 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 IFNA14P01570 189 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 GYPBP06028 91 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 VIMP08670 466 aaKnown RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TNFRSF1AP19438 455 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 GSTM3P21266 225 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TUBG1P23258 451 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 PAX6P26367 422 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 DCTDP32321 178 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 PITPNBP48739 271 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 ARHGDIAP52565 204 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 SELENOVP59797 346 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 CSNK2BP67870 215 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 FAM3AP98173 230 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 DEFA6Q01524 100 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 BAMBIQ13145 260 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 CRMP1Q14194 572 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 OCLNQ16625 522 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 MOGQ16653 247 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 PDLIM3Q53GG5 364 aaPredicted RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 FBLN7Q53RD9 439 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 FGD3Q5JSP0 725 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TEX36Q5VZQ5 186 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 C16orf87Q6PH81 154 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 SHISA2Q6UWI4 295 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TREML4Q6UXN2 200 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 FKBP9P1Q75LS8 142 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 KRT74Q7RTS7 529 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 PIGWQ7Z7B1 504 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 C1orf174Q8IYL3 243 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 ALDH16A1Q8IZ83 802 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 KLHL36Q8N4N3 616 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 SPICQ8N5J4 248 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 KIR3DL3Q8N743 410 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 CELF2-AS1Q8N7Q2 184 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 ATG16L2Q8NAA4 619 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 GJC3Q8NFK1 279 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 OR52E2Q8NGJ4 325 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 OR9Q1Q8NGQ5 310 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 OR13G1Q8NGZ3 307 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 LINC01006Q8NI28 216 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 PPP1R35Q8TAP8 253 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 HPSE2Q8WWQ2 592 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 RNF166Q96A37 237 aaPredicted RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TMIGD2Q96BF3 282 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 SGK3Q96BR1 496 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 NEIL1Q96FI4 390 aaPredicted RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 PYURFQ96I23 114 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 ATF6BQ99941 703 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 HOPXQ9BPY8 73 aaPredicted RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 KCTD14Q9BQ13 255 aaPredicted RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 ELAC2Q9BQ52 826 aaKnown RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 NUDT16L1Q9BRJ7 211 aaKnown RBP3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TLNRD1Q9H1K6 362 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 WDR13Q9H1Z4 485 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 KCNN2Q9H2S1 579 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 MED20Q9H944 212 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 NTN4Q9HB63 628 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 IL1RAPQ9NPH3 570 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TUBG2Q9NRH3 451 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TAS2R1Q9NYW7 299 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 TMEM5Q9Y2B1 443 aa3.66□□□□□ -1.82
PPP4R1-209ENST00000578329 hCG_38984A0A1B0GV85 526 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 DHRS12A0PJE2 317 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 FAM183AA6NL82 134 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 ZNF879B4DU55 563 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 RNASEK-C17orf49H0YIS7 233 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 M0R135 149 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 LGALS8O00214 317 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 ACOT8O14734 319 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 PHYHO14832 338 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 OR10H3O60404 316 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 NDUFA7O95182 113 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 GADD45GO95257 159 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 IGLV3-1P01715 115 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 GYPAP02724 150 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 NR2C1P13056 603 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 RPS2P15880 293 aaKnown RBP3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 SPI1P17947 270 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 PRDX6P30041 224 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 RRM2P31350 389 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 OPRL1P41146 370 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 IER3P46695 156 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 TGM4P49221 684 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 RGS6P49758 472 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 PRKXP51817 358 aa3.65□□□□□ -1.83
PPP4R1-209ENST00000578329 ERVFRD-1P60508 538 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms