RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SLC1A7O00341 560 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF593O00488 134 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-216ENST00000575599 CDC14BO60729 498 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 WBP4O75554 376 aaKnown RBP11.29□□□□□ -0.6
RPAIN-216ENST00000575599 COL8A2P25067 703 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 HTR1FP30939 366 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 MMP15P51511 669 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 BLVRAP53004 296 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 ECH1Q13011 328 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 TMED1Q13445 227 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 HLXQ14774 488 aaPredicted RBP11.29□□□□□ -0.6
RPAIN-216ENST00000575599 SMN1Q16637 294 aaKnown RBP11.29□□□□□ -0.6
RPAIN-216ENST00000575599 PCGF3Q3KNV8 242 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 KLHL22Q53GT1 634 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 SLC35D3Q5M8T2 416 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 LINC01590Q5TEZ4 76 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 AADACL4Q5VUY2 407 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 SPATC1Q76KD6 591 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 ERI1Q8IV48 349 aaKnown RBP11.29□□□□□ -0.6
RPAIN-216ENST00000575599 STX19Q8N4C7 294 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 OR10S1Q8NGN2 331 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 OR6N2Q8NGY6 317 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 RDH5Q92781 318 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 MYDGFQ969H8 173 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 YIPF5Q969M3 257 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 INTS14Q96SY0 518 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 COPS4Q9BT78 406 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 MSL2Q9HCI7 577 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 AMBNQ9NP70 447 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 CYSLTR2Q9NS75 346 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 WARS2Q9UGM6 360 aaKnown RBP11.29□□□□□ -0.6
RPAIN-216ENST00000575599 PURGQ9UJV8 347 aaKnown RBP11.29□□□□□ -0.6
RPAIN-216ENST00000575599 PCDHGB5Q9Y5G0 923 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 J3QW42 95 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 M0R135 149 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 XPNPEP2O43895 674 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 GLCEO94923 617 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 IGHV1-46P01743 117 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ACSM4P0C7M7 580 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ACHEP22303 614 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 TUBG1P23258 451 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 GIFP27352 417 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 GSTT1P30711 240 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 MTNR1AP48039 350 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 SLC6A9P48067 706 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 EIF2B1Q14232 305 aaKnown RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 TAF13Q15543 124 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 RSPO1Q2MKA7 263 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 KRTAP27-1Q3LI81 207 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ZMAT1Q5H9K5 638 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 OR5AS1Q8N127 324 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 OR5L1Q8NGL2 311 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 PTP4A1Q93096 173 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 SPTSSAQ969W0 71 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 SLAMF6Q96DU3 332 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ZMYND19Q96E35 227 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF799Q96GE5 643 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 POM121Q96HA1 1249 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CCDC90BQ9GZT6 254 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 SAP30LQ9HAJ7 183 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF275Q9NSD4 429 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CENPMQ9NSP4 180 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 PLCXD1Q9NUJ7 323 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CGGBP1Q9UFW8 167 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 SNX5Q9Y5X3 404 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CSPG4Q6UVK1 2322 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ZFHX3Q15911 3703 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 LRP5LA4QPB2 252 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CD5LO43866 347 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 LCATP04180 440 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 DBTP11182 482 aaKnown RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF16P17020 682 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 KITLGP21583 273 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CRHBPP24387 322 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 LIPAP38571 399 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 GPR6P46095 362 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 TPTEP56180 551 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 GABARAPL2P60520 117 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF91Q05481 1191 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 POU4F2Q12837 409 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 RIN1Q13671 783 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 KCTD21Q4G0X4 260 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 AHSA2Q719I0 299 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 DPY19L4Q7Z388 723 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 NAA40Q86UY6 237 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 TEAD3Q99594 435 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 C1QTNF5Q9BXJ0 243 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 NARFLQ9H6Q4 476 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 DDX28Q9NUL7 540 aaKnown RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CHCHD3Q9NX63 227 aaKnown RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 NKIRAS2Q9NYR9 191 aa11.28□□□□□ -0.6
RPAIN-216ENST00000575599 CNOT2Q9NZN8 540 aaKnown RBP11.28□□□□□ -0.6
RPAIN-216ENST00000575599 PCDHGB1Q9Y5G3 927 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms