RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 HLA-DRB5Q30154 266 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 MARCH8Q5T0T0 291 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF385CQ66K41 422 aaPredicted RBP6.46□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF836Q6ZNA1 936 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 MRPS24Q96EL2 167 aaKnown RBP6.46□□□□□ -1.37
CNOT1-216ENST00000569240 MS4A3Q96HJ5 214 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 SGCZQ96LD1 299 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 SPANXDQ9BXN6 97 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 PLEK2Q9NYT0 353 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 NTMQ9P121 344 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 CPA4Q9UI42 421 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 C19orf53Q9UNZ5 99 aaPredicted RBP6.46□□□□□ -1.37
CNOT1-216ENST00000569240 KAT6AQ92794 2004 aa6.46□□□□□ -1.37
CNOT1-216ENST00000569240 A0A0B4J293 547 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 STC2O76061 302 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 FGF18O76093 207 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 CXCL14O95715 111 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM11P17152 192 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 GABRA4P48169 554 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 LCN2P80188 198 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 DMKNQ6E0U4 476 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 LHFPL2Q6ZUX7 228 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 BPIFA4PQ86YQ2 179 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 OR2C3Q8N628 320 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 LCORQ96JN0 433 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 MRGPRX3Q96LB0 322 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 RIMBP3CA6NJZ7 1639 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 RIMBP3BA6NNM3 1639 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 RIMBP3Q9UFD9 1639 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 LOC107986453A0A1B0GWG9 222 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF840PA6NDX5 716 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 B4GALT2O60909 372 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 SBK3P0C264 359 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 CDKN2AP42771 156 aaKnown RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 PITX1P78337 314 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF660Q6AZW8 331 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 IRF7Q92985 503 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 MRPL24Q96A35 216 aaKnown RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 S1PR5Q9H228 398 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 PEF1Q9UBV8 284 aaKnown RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 NALCNQ8IZF0 1738 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 GAGE10A6NGK3 116 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 H7C1C5 153 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 SOD2P04179 222 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 CYC1P08574 325 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 RPS4Y1P22090 263 aaKnown RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 CLDN15P56746 228 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 CD200R1LQ6Q8B3 271 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 DHRS11Q6UWP2 260 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 RPS4Y2Q8TD47 263 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 TCTN2Q96GX1 697 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 TINAGL1Q9GZM7 467 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 SFXN1Q9H9B4 322 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 RCC2Q9P258 522 aaKnown RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 PCDHGA9Q9Y5G4 932 aaKnown RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 AQP7O14520 342 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 USP2O75604 605 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 CST5P28325 142 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 BMI1P35226 326 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 ERV3-1Q14264 604 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 C18orf21Q32NC0 220 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM156Q8N614 296 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 SPSB1Q96BD6 273 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 MS4A6EQ96DS6 147 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 C2orf88Q9BSF0 95 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 FBXL17Q9UF56 701 aa6.46□□□□□ -1.38
CNOT1-216ENST00000569240 C4AP0C0L4 1744 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 C4BP0C0L5 1744 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 A0A0G2JLL6 359 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KIR2DS5A0A0G2JLQ3 304 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 A0A0G2JNG1 304 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 H3BQ15 152 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KIR2DS3K7RE56 304 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 RTCAO00442 366 aaKnown RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 UBE2CO00762 179 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 FABP2P12104 132 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 FCGR2AP12318 317 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 THBS4P35443 961 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ARF6P62330 175 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ZXDBP98169 803 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KIR2DS5Q14953 304 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 PRRT2Q7Z6L0 340 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF761Q86XN6 746 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM183AQ8IXX5 376 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 LRRC18Q8N456 261 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 KREMEN2Q8NCW0 462 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 MARCH1Q8TCQ1 289 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 C10orf35Q96D05 121 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TAAR6Q96RI8 345 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM106CQ9BVX2 250 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 BOCQ9BWV1 1114 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 VN1R3Q9BXE9 311 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM167BQ9NRX6 74 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 SIRT3Q9NTG7 399 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-216ENST00000569240 P4HTMQ9NXG6 502 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TMED7Q9Y3B3 224 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 NPTNQ9Y639 398 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
CNOT1-216ENST00000569240 A6NJY4 79 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms