RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 THRSPQ92748 146 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 ELOVL5Q9NYP7 299 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 EPG5Q9HCE0 2579 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 A0A0U1RQV5 110 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 A0A1B0GTI1 187 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 IL1AP01583 271 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 MTNR1BP49286 362 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 FAM27E3Q08E93 113 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 MYPOPQ86VE0 399 aaPredicted RBP26.54■■□□□ 1.84
CTCF-203ENST00000566078 ASB5Q8WWX0 329 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 MED18Q9BUE0 208 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 PRR14LQ5THK1 2151 aa26.53■■□□□ 1.84
CTCF-203ENST00000566078 TRBV5-7A0A0A0MS05 114 aa26.53■■□□□ 1.84
CTCF-203ENST00000566078 CBR1P16152 277 aa26.53■■□□□ 1.84
CTCF-203ENST00000566078 C1QTNF5Q9BXJ0 243 aa26.53■■□□□ 1.84
CTCF-203ENST00000566078 TPK1Q9H3S4 243 aa26.53■■□□□ 1.84
CTCF-203ENST00000566078 SMG1Q96Q15 3661 aaKnown RBP26.52■■□□□ 1.84
CTCF-203ENST00000566078 SMIM30A4D0T7 59 aa26.52■■□□□ 1.84
CTCF-203ENST00000566078 TBC1D28Q2M2D7 210 aa26.52■■□□□ 1.84
CTCF-203ENST00000566078 TIMM23BQ5SRD1 257 aa26.52■■□□□ 1.84
CTCF-203ENST00000566078 STEAP2Q8NFT2 490 aa26.52■■□□□ 1.84
CTCF-203ENST00000566078 FAM71F1Q96KD3 344 aaPredicted RBP26.52■■□□□ 1.84
CTCF-203ENST00000566078 SOX7Q9BT81 388 aa26.52■■□□□ 1.84
CTCF-203ENST00000566078 C1QTNF6Q9BXI9 259 aa26.52■■□□□ 1.84
CTCF-203ENST00000566078 ACTR6Q9GZN1 396 aa26.52■■□□□ 1.84
CTCF-203ENST00000566078 CCDC59Q9P031 241 aaKnown RBP26.52■■□□□ 1.84
CTCF-203ENST00000566078 LMX1BO60663 402 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 IGLV3-1P01715 115 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 CD2P06729 351 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 CCL1P22362 96 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 TLE1Q04724 770 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 DGUOKQ16854 277 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 DOK3Q7L591 496 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 GALNT11Q8NCW6 608 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 LYZL4Q96KX0 146 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 SLC25A15Q9Y619 301 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 CFAP46Q8IYW2 2715 aa26.51■■□□□ 1.83
CTCF-203ENST00000566078 IGKV3-15P01624 115 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 RAF1P04049 648 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 ADORA2A-AS1P86434 159 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 PAQR4Q8N4S7 273 aaPredicted RBP26.5■■□□□ 1.83
CTCF-203ENST00000566078 OR2AE1Q8NHA4 323 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 TRAV1-2A0A0B4J238 106 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 CHRNB4P30926 498 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 CCKARP32238 428 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 GLYATL3Q5SZD4 288 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 COLCA1Q6ZS62 124 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 SGK3Q96BR1 496 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 BBC3Q96PG8 261 aaPredicted RBP26.5■■□□□ 1.83
CTCF-203ENST00000566078 COQ3Q9NZJ6 369 aa26.5■■□□□ 1.83
CTCF-203ENST00000566078 HEATR1Q9H583 2144 aaKnown RBP26.49■■□□□ 1.83
CTCF-203ENST00000566078 SRMP19623 302 aa26.49■■□□□ 1.83
CTCF-203ENST00000566078 SOX6P35712 828 aa26.49■■□□□ 1.83
CTCF-203ENST00000566078 HNRNPA0Q13151 305 aaKnown RBP26.49■■□□□ 1.83
CTCF-203ENST00000566078 PRR7Q8TB68 274 aa26.49■■□□□ 1.83
CTCF-203ENST00000566078 SLC25A46Q96AG3 418 aa26.49■■□□□ 1.83
CTCF-203ENST00000566078 CCDC120Q96HB5 630 aa26.49■■□□□ 1.83
CTCF-203ENST00000566078 REEP6Q96HR9 211 aa26.49■■□□□ 1.83
CTCF-203ENST00000566078 ZNF275Q9NSD4 429 aaPredicted RBP26.49■■□□□ 1.83
CTCF-203ENST00000566078 ANKRD61A6NGH8 418 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 NCR1O76036 304 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 GNLYP22749 145 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 UQCRFS1P47985 274 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 CAV3P56539 151 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 IGFBP7Q16270 282 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 TPRA1Q86W33 373 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 OR1J2Q8NGS2 313 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 SLIRPQ9GZT3 109 aaKnown RBP26.48■■□□□ 1.83
CTCF-203ENST00000566078 CDH20Q9HBT6 801 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 PMF1-BGLAPU3KQ54 211 aa26.48■■□□□ 1.83
CTCF-203ENST00000566078 DIDO1Q9BTC0 2240 aaKnown RBP26.48■■□□□ 1.83
CTCF-203ENST00000566078 A0A1B0GUH1 482 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 C16orf97H3BN30 126 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 ASCL1P50553 236 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 SLC25A35Q3KQZ1 300 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 APOBEC3DQ96AK3 386 aaPredicted RBP26.47■■□□□ 1.83
CTCF-203ENST00000566078 MUCL1Q96DR8 90 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 BARHL1Q9BZE3 327 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 SLITRK2Q9H156 845 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 TCF7L1Q9HCS4 588 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 CRNNQ9UBG3 495 aaPredicted RBP26.47■■□□□ 1.83
CTCF-203ENST00000566078 TRAV8-7A0A075B6U6 113 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 XRCC2O43543 280 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 ZNF12P17014 697 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 WNT5AP41221 380 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 RORCP51449 518 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 PPA1Q15181 289 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 TAB1Q15750 504 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 PLPP7Q8NBV4 271 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 FGGYQ96C11 551 aa26.47■■□□□ 1.83
CTCF-203ENST00000566078 FAM90A27PA6NNH2 459 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 DHRS3O75911 302 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 RAB3BP20337 219 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 OR14K1Q8NGZ2 314 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 RGCCQ9H4X1 137 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 PLEKHA1Q9HB21 404 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 MOV10Q9HCE1 1003 aaKnown RBP26.46■■□□□ 1.83
CTCF-203ENST00000566078 TAS2R4Q9NYW5 299 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 ZNF391Q9UJN7 358 aa26.46■■□□□ 1.83
CTCF-203ENST00000566078 HIVEP3Q5T1R4 2406 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms