RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 AP4S1Q9Y587 144 aa10.57□□□□□ -0.72
RNF40-208ENST00000565995 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 IGHV1-69DA0A0B4J2H0 117 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 GNGT2O14610 69 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 TIPRLO75663 272 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 TSPAN9O75954 239 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 TOX4O94842 621 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 BAG2O95816 211 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 IGHV1-69P01742 117 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 SFTPBP07988 381 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 IFNA8P32881 189 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 YAP1P46937 504 aaKnown RBP10.56□□□□□ -0.72
RNF40-208ENST00000565995 RAD23AP54725 363 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 HIST1H3AP68431 136 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 MAB21L1Q13394 359 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 TOP3AQ13472 1001 aaPredicted RBP10.56□□□□□ -0.72
RNF40-208ENST00000565995 C2orf68Q2NKX9 166 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 CCDC92Q53HC0 331 aaPredicted RBP10.56□□□□□ -0.72
RNF40-208ENST00000565995 FAM201AQ5SY85 155 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 HIST2H3PS2Q5TEC6 136 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 OR2T2Q6IF00 324 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 GDPGP1Q6ZNW5 385 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 HIST2H3AQ71DI3 136 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 REC114Q7Z4M0 266 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 OR5AS1Q8N127 324 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 OR1F12Q8NHA8 337 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 SLC7A6Q92536 515 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 WDFY2Q96P53 400 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 PCGF1Q9BSM1 259 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 CHID1Q9BWS9 393 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 S100A14Q9HCY8 104 aa10.56□□□□□ -0.72
RNF40-208ENST00000565995 TEX13CA0A0J9YWL9 993 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 F5H5P2 479 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 DIRAS1O95057 198 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 SEMG1P04279 462 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 FCGR1AP12314 374 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 CD200P41217 278 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 SPIBQ01892 262 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 RCN1Q15293 331 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 KCNMB1Q16558 191 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 CLEC12AQ5QGZ9 265 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 Q6ZPA2 131 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 COLCA1Q6ZS62 124 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 PNLDC1Q8NA58 520 aaKnown RBP10.55□□□□□ -0.72
RNF40-208ENST00000565995 APOBEC3DQ96AK3 386 aaPredicted RBP10.55□□□□□ -0.72
RNF40-208ENST00000565995 SLCO4A1Q96BD0 722 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 DPAGT1Q9H3H5 408 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 TMEM100Q9NV29 134 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 ENPP4Q9Y6X5 453 aa10.55□□□□□ -0.72
RNF40-208ENST00000565995 NDUFA2O43678 99 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 PIP5K1CO60331 668 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 E2F6O75461 281 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 PTBP3O95758 552 aaKnown RBP10.54□□□□□ -0.72
RNF40-208ENST00000565995 CST1P01037 141 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 IFI30P13284 250 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 FASP25445 335 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 SLC9A3P48764 834 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 PRKCDQ05655 676 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 ST3GAL3Q11203 375 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 RSPO1Q2MKA7 263 aaPredicted RBP10.54□□□□□ -0.72
RNF40-208ENST00000565995 FAM110DQ8TAY7 271 aaPredicted RBP10.54□□□□□ -0.72
RNF40-208ENST00000565995 LRTOMTQ8WZ04 291 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 DUS3LQ96G46 650 aaKnown RBP10.54□□□□□ -0.72
RNF40-208ENST00000565995 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 DMRTB1Q96MA1 342 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 FNDC11Q9BVV2 318 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 REEP1Q9H902 201 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 IL1RAPQ9NPH3 570 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 ARMC1Q9NVT9 282 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 PTTG3PQ9NZH4 202 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 RHCGQ9UBD6 479 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 CTSZQ9UBR2 303 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 A4GNTQ9UNA3 340 aa10.54□□□□□ -0.72
RNF40-208ENST00000565995 A0A0U1RQK1 487 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 PRSS37A4D1T9 235 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 C3orf80F5H4A9 247 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 G3V4G9 280 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 H3BNX3 289 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 J3KTA2 159 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 OPN1MWP04001 364 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 DBHP09172 617 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 CSF1P09603 554 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 OPN1MW2P0DN77 364 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 OPN1MW3P0DN78 364 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 IRF2P14316 349 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 RHCEP18577 417 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 FPR3P25089 353 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 MAGEA2P43356 314 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 COX10Q12887 443 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 KCNJ8Q15842 424 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 KRTAP27-1Q3LI81 207 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 FGD3Q5JSP0 725 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 METTL11BQ5VVY1 283 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 C1orf94Q6P1W5 598 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 METAP1DQ6UB28 335 aaPredicted RBP10.53□□□□□ -0.72
RNF40-208ENST00000565995 FAM122BQ7Z309 247 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 IGFN1Q86VF2 1251 aa10.53□□□□□ -0.72
RNF40-208ENST00000565995 RNF113BQ8IZP6 322 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms