RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 IGHV1-18A0A0C4DH31 117 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 P2RY10O00398 339 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 GABRPO00591 440 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 ICMTO60725 284 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 CELA3BP08861 270 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 TUBG1P23258 451 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 MYL9P24844 172 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 PCSK6P29122 969 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 RPS23P62266 143 aaKnown RBP11.11□□□□□ -0.63
CLK3-214ENST00000564096 HGFACQ04756 655 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 CD200R1LQ6Q8B3 271 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 PRSS45Q7RTY3 260 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 MRPL21Q7Z2W9 205 aaKnown RBP11.11□□□□□ -0.63
CLK3-214ENST00000564096 OR13C3Q8NGS6 347 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 ABHD4Q8TB40 342 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 OR51E1Q8TCB6 317 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 ITFG2Q969R8 447 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 REEP6Q96HR9 211 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 BCL2L14Q9BZR8 327 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 OR51E2Q9H255 320 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 TUBG2Q9NRH3 451 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 TBCCD1Q9NVR7 557 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 SF3B6Q9Y3B4 125 aaKnown RBP11.11□□□□□ -0.63
CLK3-214ENST00000564096 CEPT1Q9Y6K0 416 aa11.11□□□□□ -0.63
CLK3-214ENST00000564096 FASNP49327 2511 aaKnown RBP11.1□□□□□ -0.63
CLK3-214ENST00000564096 TRBV5-5A0A0J9YX44 114 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 TUBAL3A6NHL2 446 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 A6NHS1 94 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 H3BSA7 217 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 SMPD2O60906 423 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 DHRS3O75911 302 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 ATE1O95260 518 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 CCL2P13500 99 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 ZNF20P17024 532 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 CCL1P22362 96 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 PTAFRP25105 342 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 FGF9P31371 208 aaPredicted RBP11.1□□□□□ -0.63
CLK3-214ENST00000564096 CRYBB2P43320 205 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 RAD52P43351 418 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 FABP5Q01469 135 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 NAAAQ02083 359 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 SNAI3Q3KNW1 292 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 ACSM3Q53FZ2 586 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 ZMAT1Q5H9K5 638 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 SEZ6L2Q6UXD5 910 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 COLCA1Q6ZS62 124 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 SLC16A12Q6ZSM3 486 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 USP43Q70EL4 1123 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 FTMTQ8N4E7 242 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 RGP1Q92546 391 aaPredicted RBP11.1□□□□□ -0.63
CLK3-214ENST00000564096 DGCR14Q96DF8 476 aaKnown RBP11.1□□□□□ -0.63
CLK3-214ENST00000564096 ZC3HAV1LQ96H79 300 aaKnown RBP11.1□□□□□ -0.63
CLK3-214ENST00000564096 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
CLK3-214ENST00000564096 KCTD7Q96MP8 289 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 OR14A2Q96R54 314 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 C1QTNF6Q9BXI9 259 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 SLITRK2Q9H156 845 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 NBEAQ8NFP9 2946 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
CLK3-214ENST00000564096 IGHV2OR16-5A0A0B4J2B6 119 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 H3BMQ9 156 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 GPX5O75715 221 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 SC5DO75845 299 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 RAF1P04049 648 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 TFF3Q07654 80 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 RSPO1Q2MKA7 263 aaPredicted RBP11.09□□□□□ -0.63
CLK3-214ENST00000564096 HSD17B12Q53GQ0 312 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 GLYATL3Q5SZD4 288 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 C22orf42Q6IC83 251 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 RFPL4BQ6ZWI9 263 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 CEACAM19Q7Z692 300 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 MYPOPQ86VE0 399 aaPredicted RBP11.09□□□□□ -0.63
CLK3-214ENST00000564096 OR13C5Q8NGS8 318 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 RPL3LQ92901 407 aaKnown RBP11.09□□□□□ -0.63
CLK3-214ENST00000564096 TMEM106AQ96A25 262 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 C10orf35Q96D05 121 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 DERL3Q96Q80 235 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
CLK3-214ENST00000564096 ESRP2Q9H6T0 727 aaKnown RBP11.09□□□□□ -0.63
CLK3-214ENST00000564096 TXNL4BQ9NX01 149 aaKnown RBP11.09□□□□□ -0.63
CLK3-214ENST00000564096 NPAP1Q9NZP6 1156 aa11.09□□□□□ -0.63
CLK3-214ENST00000564096 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 UCHL1P09936 223 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 EPXP11678 715 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 ZNF35P13682 527 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 SELEP16581 610 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 FSTP19883 344 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 NR4A1P22736 598 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 CD40P25942 277 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
CLK3-214ENST00000564096 WNT5AP41221 380 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 SOX2P48431 317 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 PPP1CBP62140 327 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 RPS11P62280 158 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLK3-214ENST00000564096 LSM3P62310 102 aaKnown RBP11.08□□□□□ -0.64
CLK3-214ENST00000564096 PPP3R1P63098 170 aa11.08□□□□□ -0.64
CLK3-214ENST00000564096 CTF1Q16619 201 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms