RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 OR5D14Q8NGL3 314 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 PGAM5Q96HS1 289 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 SGCZQ96LD1 299 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 BANF2Q9H503 90 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 DLL4Q9NR61 685 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 PLA2G3Q9NZ20 509 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 MEIKINA0A087WXM9 373 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 MEGF11A6BM72 1044 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 LDLRAD4O15165 306 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 DHHO43323 396 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 EIF1BO60739 113 aaKnown RBP9.3□□□□□ -0.92
TPM1-210ENST00000558264 HPP00738 406 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 HCKP08631 526 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 GABRA1P14867 456 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 CARD18P57730 90 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 SCGB2B2Q4G0G5 96 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 C1orf100Q5SVJ3 147 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 CDCP2Q5VXM1 449 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 OR52W1Q6IF63 320 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 GLDNQ6ZMI3 551 aaPredicted RBP9.3□□□□□ -0.92
TPM1-210ENST00000558264 C17orf107Q6ZR85 190 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 GGNQ86UU5 652 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 NKAIN3Q8N8D7 197 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 CLEC1AQ8NC01 280 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 TMEM104Q8NE00 496 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 GPX8Q8TED1 209 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 C15orf40Q8WUR7 153 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 NABP1Q96AH0 204 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 TMEM41AQ96HV5 264 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 LYZL4Q96KX0 146 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 HYLS1Q96M11 299 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 SIGLEC12Q96PQ1 595 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 NAA11Q9BSU3 229 aaPredicted RBP9.3□□□□□ -0.92
TPM1-210ENST00000558264 ZNF436Q9C0F3 470 aaPredicted RBP9.3□□□□□ -0.92
TPM1-210ENST00000558264 NELFAQ9H3P2 528 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 SLA2Q9H6Q3 261 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 PLEK2Q9NYT0 353 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 LRFN1Q9P244 771 aa9.3□□□□□ -0.92
TPM1-210ENST00000558264 CCDC187A0A096LP49 1063 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 A0A1B0GUH1 482 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 LOC390937A0A1W2PQ73 354 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 TTLL8A6PVC2 850 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 AKAIN1P0CW23 69 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 RAG2P55895 527 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 CLDN15P56746 228 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 ZNF239Q16600 458 aaKnown RBP9.29□□□□□ -0.92
TPM1-210ENST00000558264 C2orf68Q2NKX9 166 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 SFRP5Q5T4F7 317 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 METTL11BQ5VVY1 283 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 TMED4Q7Z7H5 227 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 CD163Q86VB7 1156 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 LIX1LQ8IVB5 337 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 OR5AS1Q8N127 324 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 SLC22A24Q8N4F4 322 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 OR10D3Q8NH80 312 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 ABHD3Q8WU67 409 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 SNAPC3Q92966 411 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 FBXO17Q96EF6 278 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 CRLF2Q9HC73 371 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 EIF3KQ9UBQ5 218 aaKnown RBP9.29□□□□□ -0.92
TPM1-210ENST00000558264 IL17BQ9UHF5 180 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 LOC102725191A0A1B0GVB3 256 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 RAB3DO95716 219 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 IGHEP01854 428 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 AMY2AP04746 511 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 SERPINA7P05543 415 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 LPLP06858 475 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 ICAM2P13598 275 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 B4GALT1P15291 398 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 FAHP16930 419 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 DNASE1P24855 282 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 SRD5A2P31213 254 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 FAUP35544 74 aaKnown RBP9.29□□□□□ -0.92
TPM1-210ENST00000558264 CD96P40200 585 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 HTR2BP41595 481 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 CHAF1BQ13112 559 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 RBMS2Q15434 407 aaKnown RBP9.29□□□□□ -0.92
TPM1-210ENST00000558264 ATP1A1-AS1Q5TC04 95 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 GLIPR1L1Q6UWM5 242 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 OR2AE1Q8NHA4 323 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 TMEM54Q969K7 222 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 GPER1Q99527 375 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 SELENOIQ9C0D9 397 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 EXO5Q9H790 373 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 CACNA1HO95180 2353 aa9.29□□□□□ -0.92
TPM1-210ENST00000558264 IGKV1-9A0A0C4DH69 117 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 FAM166BA8MTA8 275 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 RAB27BO00194 218 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 CREBL2O60519 120 aaPredicted RBP9.28□□□□□ -0.92
TPM1-210ENST00000558264 MPIG6BO95866 241 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 TGM6O95932 706 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 POU3F2P20265 443 aaPredicted RBP9.28□□□□□ -0.92
TPM1-210ENST00000558264 ITGA3P26006 1051 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 FKBP2P26885 142 aaKnown RBP9.28□□□□□ -0.92
TPM1-210ENST00000558264 RSPO1Q2MKA7 263 aaPredicted RBP9.28□□□□□ -0.92
TPM1-210ENST00000558264 CDNFQ49AH0 187 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 CCDC92Q53HC0 331 aaPredicted RBP9.28□□□□□ -0.92
TPM1-210ENST00000558264 TRAPPC6BQ86SZ2 158 aa9.28□□□□□ -0.92
TPM1-210ENST00000558264 FJX1Q86VR8 437 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms