RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 LOC107986453A0A1B0GWG9 222 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 WIPF3A6NGB9 483 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 TBX1O43435 398 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 SC5DO75845 299 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 CLDN14O95500 239 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 HOXC12P31275 282 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 DCTDP32321 178 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 ARR3P36575 388 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 ACSM3Q53FZ2 586 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 CEACAM19Q7Z692 300 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 WFDC8Q8IUA0 241 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 ZNF101Q8IZC7 436 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 NANOS1Q8WY41 292 aaKnown RBP9.32□□□□□ -0.92
TDP1-211ENST00000555178 RNASE6Q93091 150 aaKnown RBP9.32□□□□□ -0.92
TDP1-211ENST00000555178 SPTSSAQ969W0 71 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 POM121L2Q96KW2 1035 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 LYZL4Q96KX0 146 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 MYCBPQ99417 103 aaPredicted RBP9.32□□□□□ -0.92
TDP1-211ENST00000555178 NDUFA13Q9P0J0 144 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 NUFIP1Q9UHK0 495 aaKnown RBP9.32□□□□□ -0.92
TDP1-211ENST00000555178 TMEM212A6NML5 194 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 PIN1P1O15428 100 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 NOL3O60936 208 aaKnown RBP9.31□□□□□ -0.92
TDP1-211ENST00000555178 NGFP01138 241 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 HLA-DPB1P04440 258 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 CLEC2LP0C7M8 214 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 CECR9P0C854 216 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ZNF182P17025 639 aaPredicted RBP9.31□□□□□ -0.92
TDP1-211ENST00000555178 CALCRP30988 508 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 WNT5AP41221 380 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 CCR9P51686 369 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 MRPL28Q13084 256 aaKnown RBP9.31□□□□□ -0.92
TDP1-211ENST00000555178 TIMM23BQ5SRD1 257 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ELMOD2Q8IZ81 293 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ALDH16A1Q8IZ83 802 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ZNF808Q8N4W9 903 aaPredicted RBP9.31□□□□□ -0.92
TDP1-211ENST00000555178 SLC30A7Q8NEW0 376 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 PGAM5Q96HS1 289 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 COMMD4Q9H0A8 199 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 NIPAL2Q9H841 368 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 SSR3Q9UNL2 185 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 A0A1B0GTI1 187 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 TRDV1A0A1B0GX56 115 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 IGKV3-15P01624 115 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 LCATP04180 440 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 SERPINA5P05154 406 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 EPXP11678 715 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 CALRP27797 417 aaKnown RBP9.31□□□□□ -0.92
TDP1-211ENST00000555178 TPTEP56180 551 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ERVS71-1P61550 626 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 MXD1Q05195 221 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ECH1Q13011 328 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 PPA1Q15181 289 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 YIF1BQ5BJH7 314 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ZMAT1Q5H9K5 638 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 ASPHD2Q6ICH7 369 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 COMMD2Q86X83 199 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 FAM71F1Q96KD3 344 aaPredicted RBP9.31□□□□□ -0.92
TDP1-211ENST00000555178 NOX4Q9NPH5 578 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 GPR84Q9NQS5 396 aa9.31□□□□□ -0.92
TDP1-211ENST00000555178 IQCMA0A1B0GVH7 501 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 M0R1B8 84 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 GPRIN2O60269 458 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 NCR1O76036 304 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 CD1AP06126 327 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 OCM2P0CE71 109 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 CBR1P16152 277 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 SERPINB10P48595 397 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 CAV3P56539 151 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 PLP2Q04941 152 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 TIMM50Q3ZCQ8 353 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 DMRTC1Q5HYR2 192 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 TMEM255AQ5JRV8 349 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 XKRXQ6PP77 449 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 DRAM2Q6UX65 266 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 RFPL4BQ6ZWI9 263 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 EGFL6Q8IUX8 553 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 C17orf78Q8N4C9 275 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 STEAP2Q8NFT2 490 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 TSEN15Q8WW01 171 aaKnown RBP9.3□□□□□ -0.92
TDP1-211ENST00000555178 DERL3Q96Q80 235 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 NKX3-1Q99801 234 aaPredicted RBP9.3□□□□□ -0.92
TDP1-211ENST00000555178 KCNS3Q9BQ31 491 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 WACQ9BTA9 647 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 FBN2P35556 2912 aa9.3□□□□□ -0.92
TDP1-211ENST00000555178 TRBV5-5A0A0J9YX44 114 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 A1L4Q6 167 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 DPRXA6NFQ7 191 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 ZNF879B4DU55 563 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 ZNF701M0R085 212 aaPredicted RBP9.29□□□□□ -0.92
TDP1-211ENST00000555178 CLDN1O95832 211 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 IGLV1-44P01699 117 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 CD53P19397 219 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 FGF9P31371 208 aaPredicted RBP9.29□□□□□ -0.92
TDP1-211ENST00000555178 SDC2P34741 201 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 APLNRP35414 380 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 MSMPQ1L6U9 139 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 GLYATL3Q5SZD4 288 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 NR2C2APQ86WQ0 139 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 MS4A15Q8N5U1 240 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms