RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 DYDC1Q8WWB3 177 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CHCHD10Q8WYQ3 142 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ESR2Q92731 530 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 UCN3Q969E3 161 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ARL5BQ96KC2 179 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CATSPER2Q96P56 530 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 OR5B12Q96R08 314 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PAXXQ9BUH6 204 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 FAIM2Q9BWQ8 316 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ACTR3CQ9C0K3 210 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 RACGAP1Q9H0H5 632 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PIGUQ9H490 435 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 PSTPIP2Q9H939 334 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 LY9Q9HBG7 655 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 SH2D2AQ9NP31 389 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF275Q9NSD4 429 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CCDC59Q9P031 241 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 DDX19BQ9UMR2 479 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 VSIG4Q9Y279 399 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 NEUROG3Q9Y4Z2 214 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 SLC25A15Q9Y619 301 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 BAZ2BQ9UIF8 2168 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 NAV2Q8IVL1 2488 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 ZNF638Q14966 1978 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 CLUHO75153 1309 aa3.16□□□□□ -1.9
SNHG1-217ENST00000541578 URB1O60287 2271 aaKnown RBP3.16□□□□□ -1.9
SNHG1-217ENST00000541578 DOCK6Q96HP0 2047 aa3.15□□□□□ -1.9
SNHG1-217ENST00000541578 PCNX3Q9H6A9 2034 aa3.15□□□□□ -1.9
SNHG1-217ENST00000541578 COL1A2P08123 1366 aa3.15□□□□□ -1.9
SNHG1-217ENST00000541578 IGLV3-22A0A075B6J6 115 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 A0A0B4J2A0 478 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 GLYATL1P3A0A0U1RQE8 302 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 A0A1W2PRD5 423 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 LYRM9A8MSI8 78 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 SERPINE3A8MV23 424 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 NDUFS8O00217 210 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 CDX4O14627 284 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 ZBTB5O15062 677 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 CHST1O43916 411 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 TSPAN13O95857 204 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 THY1P04216 161 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 SERPINA5P05154 406 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 GIPP09681 153 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 UBTFL6P0CB48 400 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 MGMTP16455 207 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 GPR6P46095 362 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 PLTPP55058 493 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 STXBP1P61764 594 aaKnown RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 CLINT1Q14677 625 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 NSDHLQ15738 373 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 STK11Q15831 433 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF239Q16600 458 aaKnown RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 NRF1Q16656 503 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 C15orf32Q32M92 178 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 C1orf94Q6P1W5 598 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF677Q86XU0 584 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 FBXL13Q8NEE6 735 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 OR1N2Q8NGR9 330 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 MITD1Q8WV92 249 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 PIH1D2Q8WWB5 315 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 ACOT11Q8WXI4 607 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-217ENST00000541578 VSIG2Q96IQ7 327 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 ECSITQ9BQ95 431 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 TMEM246Q9BRR3 403 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 TMEM175Q9BSA9 504 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 ZYG11BQ9C0D3 744 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 DRC3Q9H069 523 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 CENPHQ9H3R5 247 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 NRBP2Q9NSY0 501 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 CALYQ9NYX4 217 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 SHPKQ9UHJ6 478 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 LGALS13Q9UHV8 139 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 FLVCR2Q9UPI3 526 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 GINS2Q9Y248 185 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 CEP192Q8TEP8 1941 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 ATG2BQ96BY7 2078 aa3.15□□□□□ -1.91
SNHG1-217ENST00000541578 HELZ2Q9BYK8 2649 aaKnown RBP3.14□□□□□ -1.91
SNHG1-217ENST00000541578 F5P12259 2224 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 KNTC1P50748 2209 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ASXL3Q9C0F0 2248 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 KCNE1BA0A087WTH5 132 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 USP27XA6NNY8 438 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 C12orf77C9JDV5 145 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 F6UB75 175 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF780AO75290 641 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-217ENST00000541578 FCN3O75636 299 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 OR5F1O95221 314 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 KLF8O95600 359 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-217ENST00000541578 TGM6O95932 706 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 HLA-HP01893 362 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 IFNW1P05000 195 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 KRT16P08779 473 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 HOXA9P31269 272 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 SERPINB8P50452 374 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 RORCP51449 518 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 DLX1P56177 255 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 HTR4Q13639 388 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 GNA13Q14344 377 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ITIH4Q14624 930 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms