RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 FABP1P07148 127 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 FCGR2CP31995 323 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 FABP9Q0Z7S8 132 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 CEBPEQ15744 281 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 PHLDA2Q53GA4 152 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 UQCC3Q6UW78 93 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 TMPPEQ6ZT21 453 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 OR5AP2Q8NGF4 316 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 OR51F2Q8NH61 342 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 HOXB13Q92826 284 aaPredicted RBP11.62□□□□□ -0.55
MSH6-210ENST00000540021 BMFQ96LC9 184 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 NICN1Q9BSH3 213 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 PPP4R1LQ9P1A2 415 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 HEATR5AQ86XA9 2040 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 TRBV5-5A0A0J9YX44 114 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 FAM230AA0A1W2PPH8 454 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 CCDC85CA6NKD9 419 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 ITGB2P05107 769 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 RCC1P18754 421 aaPredicted RBP11.61□□□□□ -0.55
MSH6-210ENST00000540021 ID4P47928 161 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 DAP3P51398 398 aaKnown RBP11.61□□□□□ -0.55
MSH6-210ENST00000540021 FOXL2P58012 376 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 SHEQ5VZ18 495 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 TXNIPQ9H3M7 391 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 ASH2LQ9UBL3 628 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 FAM221AA4D161 298 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 HLA-DOBP13765 273 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 COL9A1P20849 921 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 TUBG1P23258 451 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 CDAP32320 146 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 RABIFP47224 123 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 VEGFBP49765 207 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 CPEB2Q7Z5Q1 589 aaKnown RBP11.61□□□□□ -0.55
MSH6-210ENST00000540021 UEVLDQ8IX04 471 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 LRRC18Q8N456 261 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 ADAMTS18Q8TE60 1221 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 SLC46A1Q96NT5 459 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 CNTNAP3Q9BZ76 1288 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 CUTCQ9NTM9 273 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 SDK2Q58EX2 2172 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 H0YIG0 161 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 ARG1P05089 322 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 NME1P15531 152 aaKnown RBP11.61□□□□□ -0.55
MSH6-210ENST00000540021 RPL12P30050 165 aaKnown RBP11.61□□□□□ -0.55
MSH6-210ENST00000540021 RFC3P40938 356 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 HERV-K104P61576 105 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 SRSF3P84103 164 aaKnown RBP11.61□□□□□ -0.55
MSH6-210ENST00000540021 TGIF1Q15583 401 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 SP6Q3SY56 376 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 KCNG3Q8TAE7 436 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 RBM24Q9BX46 236 aaKnown RBP11.61□□□□□ -0.55
MSH6-210ENST00000540021 PLXNB3Q9ULL4 1909 aa11.61□□□□□ -0.55
MSH6-210ENST00000540021 IGKV1D-42A0A075B6H8 117 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 A6NIZ1 184 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 FCGR2AP12318 317 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 ZNF43P17038 809 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 OPRM1P35372 400 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 HOXA1P49639 335 aaPredicted RBP11.6□□□□□ -0.55
MSH6-210ENST00000540021 NDUFA6P56556 154 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 HSD17B7P56937 341 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 RAP1BP61224 184 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 RAP1AP62834 184 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 GNMTQ14749 295 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 TMEM128Q5BJH2 165 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 FAM24BQ8N5W8 94 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 PHYHIPLQ96FC7 376 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 PIK3IP1Q96FE7 263 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 ZNF160Q9HCG1 818 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 GPR84Q9NQS5 396 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 STMND1H3BQB6 276 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 ACTL6AO96019 429 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 PTGFRP43088 359 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 MGAT2Q10469 447 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 WDSUB1Q8N9V3 476 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 MRGPRX1Q96LB2 322 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 MED9Q9NWA0 146 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 A0A1W2PPC1 479 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 CCNOP22674 350 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 PPICP45877 212 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 HNF4GQ14541 408 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 RHEBQ15382 184 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 MOB3CQ70IA8 216 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 SUMF2Q8NBJ7 301 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 OR56B1Q8NGI3 324 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 ARHGAP5-AS1Q96IT6 56 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 PBDC1Q9BVG4 233 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 FOXQ1Q9C009 403 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 PBOV1Q9GZY1 135 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 S1PR5Q9H228 398 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 MMP26Q9NRE1 261 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 FAM212BQ9NTI7 297 aaPredicted RBP11.6□□□□□ -0.55
MSH6-210ENST00000540021 SUSD2Q9UGT4 822 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 AMDHD2Q9Y303 409 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 ASXL3Q9C0F0 2248 aa11.6□□□□□ -0.55
MSH6-210ENST00000540021 A0A1W2PP11 408 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 hCG_1809904A0A1W2PP81 198 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 A0A1W2PR64 198 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 A0A1W2PRV1 198 aa11.59□□□□□ -0.55
MSH6-210ENST00000540021 SULT2B1O00204 365 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms