RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 PLK3Q9H4B4 646 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TMEM231Q9H6L2 316 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 MOB1AQ9H8S9 216 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 A0A1W2PPH5 198 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 NME2P1O60361 137 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 OR2F2O95006 317 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TIAL1Q01085 375 aaKnown RBP eCLIP13.12□□□□□ -0.31
CACNB1-206ENST00000539338 OR2F1Q13607 317 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
CACNB1-206ENST00000539338 LINC00303Q3SY05 128 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 MAMSTRQ6ZN01 415 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TP53I13Q8NBR0 393 aaPredicted RBP13.12□□□□□ -0.31
CACNB1-206ENST00000539338 NRTNQ99748 197 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 NIPSNAP3BQ9BS92 247 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 DECR2Q9NUI1 292 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 PROCRQ9UNN8 238 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 SIGLEC7Q9Y286 467 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 ST8SIA3O43173 380 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 CTSVO60911 334 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 OLFM2O95897 454 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 ZGLP1P0C6A0 271 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TAF9Q16594 264 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TOR2AQ5JU69 321 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 ACOT7LQ6ZUV0 252 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 OR51A2Q8NGJ7 313 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 OR2A14Q96R47 310 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TRIP11Q15643 1979 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TRAV1-2A0A0B4J238 106 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 NKX2-1P43699 371 aaPredicted RBP13.12□□□□□ -0.31
CACNB1-206ENST00000539338 TMEM182Q6ZP80 229 aaPredicted RBP13.12□□□□□ -0.31
CACNB1-206ENST00000539338 SLC38A9Q8NBW4 561 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 URGCP-MRPS24S4R325 110 aa13.12□□□□□ -0.31
CACNB1-206ENST00000539338 A0A096LPE4 126 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 A0A1W2PPZ6 126 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 HPNP05981 417 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 RPS2P15880 293 aaKnown RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 PSMB6P28072 239 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 FOXF1Q12946 379 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 SRSF5Q13243 272 aaKnown RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 TBC1D28Q2M2D7 210 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 OR13C8Q8NGS7 320 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 OR10J5Q8NHC4 309 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 APH1BQ8WW43 257 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ADAMTSL1Q8N6G6 1762 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ZNF831Q5JPB2 1677 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 A0A087WUJ7 227 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 SPTY2D1-AS1A0A0U1RR47 76 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 CXorf51AA0A1B0GTR3 108 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 TAGLN2P37802 199 aaKnown RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 PLXDC2Q6UX71 529 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ZNF707Q96C28 371 aaPredicted RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 LRRC61Q9BV99 259 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 GPR87Q9BY21 358 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 EXO1Q9UQ84 846 aaKnown RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 SLCO1B1Q9Y6L6 691 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 A0A0B4J2E0 115 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 A0A1B0GX12 115 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ENSAO43768 121 aaKnown RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 FKBP2P26885 142 aaKnown RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 FAM74A1Q5RGS3 127 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ERVMER34-1Q9H9K5 563 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 SMCO4Q9NRQ5 59 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 TIMM10BQ9Y5J6 103 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 TSTD3H0UI37 97 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 SCO1O75880 301 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 CISD3P0C7P0 127 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ATF1P18846 271 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ELLP55199 621 aaPredicted RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 RNF4P78317 190 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 ZNF547Q8IVP9 402 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 C14orf79Q96F83 325 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 OXGR1Q96P68 337 aa13.11□□□□□ -0.31
CACNB1-206ENST00000539338 NKX6-2Q9C056 277 aaPredicted RBP13.11□□□□□ -0.31
CACNB1-206ENST00000539338 LILRA5A6NI73 299 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 NXPH1P58417 271 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 RNF165Q6ZSG1 346 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 OR4C3Q8NH37 302 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.1□□□□□ -0.31
CACNB1-206ENST00000539338 RPP25Q9BUL9 199 aaKnown RBP13.1□□□□□ -0.31
CACNB1-206ENST00000539338 NUDT9Q9BW91 350 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 BARHL1Q9BZE3 327 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 HEYLQ9NQ87 328 aaPredicted RBP13.1□□□□□ -0.31
CACNB1-206ENST00000539338 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 FBXO34Q9NWN3 711 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 GDF2Q9UK05 429 aaPredicted RBP13.1□□□□□ -0.31
CACNB1-206ENST00000539338 A0A1B0GTQ1 180 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 SHISA8B8ZZ34 492 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 CXCL13O43927 109 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 LIMS3P0CW19 117 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 LIMS4P0CW20 117 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 CDAP32320 146 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 MMP15P51511 669 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 MFSD4AQ8N468 514 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
CACNB1-206ENST00000539338 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
CACNB1-206ENST00000539338 DUSP1P28562 367 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms