RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 CYC1P08574 325 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ADRA2AP08913 450 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CT62P0C5K7 136 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SEC11BP0C7V7 166 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF728P0DKX0 622 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 NPIPA8P0DM63 369 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CT45A8P0DMV1 189 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CT45A9P0DMV2 189 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 VSIG10L2P0DP72 767 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CD79AP11912 226 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 FCGR2AP12318 317 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ADRA2CP18825 462 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZBTB25P24278 435 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 FPR2P25090 351 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 PTAFRP25105 342 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CHATP28329 748 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 DUSP1P28562 367 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 MPGP29372 298 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 BLVRBP30043 206 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 AVPR2P30518 371 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 GRPRP30550 384 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 GNRHRP30968 328 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 HOXC12P31275 282 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 PTGER1P34995 402 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 BTCP35070 178 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 HRH1P35367 487 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 THBS4P35443 961 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SERPINF1P36955 418 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 TAGLN2P37802 199 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 RFC3P40938 356 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CASRP41180 1078 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPL35P42766 123 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 KIR2DL1P43626 348 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 GPR3P46089 330 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR1D4P47884 311 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 FASLGP48023 281 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC6A9P48067 706 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CSNK1A1P48729 337 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 DHPSP49366 369 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 DUSP3P51452 185 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CAV2P51636 162 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 LUMP51884 338 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SNU13P55769 128 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 BIDP55957 195 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 MTCP1P56278 107 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CLDN15P56746 228 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CLDN2P57739 230 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 NANOS3P60323 173 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 S100A10P60903 97 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 HERV-K104P61576 105 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPS11P62280 158 aaKnown RBP eCLIP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 LSM6P62312 80 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPS4XP62701 263 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPL23AP62750 156 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 UBE2IP63279 158 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPP30P78346 268 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 IGLV3-21P80748 117 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 DCDP81605 110 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 HSF1Q00613 529 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 OC90Q02509 493 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 PLP2Q04941 152 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 DUSP2Q05923 314 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SPOCK1Q08629 439 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 MGAT2Q10469 447 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 MALLQ13021 153 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 MFAP5Q13361 173 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 MRPL49Q13405 166 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ERV3-1Q14264 604 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 IL13RA2Q14627 380 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR7A5Q15622 319 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ACKR1Q16570 336 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 PCK2Q16822 640 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 MICBQ29980 383 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 EIF2S3LQ2VIR3 472 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF260Q3ZCT1 412 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 GXYLT1Q4G148 440 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 C14orf28Q4W4Y0 310 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 AKIRIN2Q53H80 203 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 CT45A2Q5DJT8 189 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 BEX5Q5H9J7 111 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM196Q5HYL7 178 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 WDR38Q5JTN6 314 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SOHLH1Q5JUK2 328 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 KRBOX4Q5JUW0 171 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 EXOSC6Q5RKV6 272 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 VAX1Q5SQQ9 334 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM240Q5SV17 173 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SFRP5Q5T4F7 317 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF684Q5T5D7 378 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 HIST2H3PS2Q5TEC6 136 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 DHRS7BQ6IAN0 325 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR7E24Q6IFN5 339 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 JMJD6Q6NYC1 403 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPUSD3Q6P087 351 aaKnown RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF529Q6P280 563 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 FBXO46Q6PJ61 603 aaPredicted RBP1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 GLIPR1L1Q6UWM5 242 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 SEZ6L2Q6UXD5 910 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 DPPA3Q6W0C5 159 aa1.85□□□□□ -2.11
RNU1-40P-201ENST00000516816 NPSR1Q6W5P4 371 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms