RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 AP2A1O95782 977 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 RALAP11233 206 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 ZNF7P17097 686 aaPredicted RBP-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 PAX6P26367 422 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 P2RY1P47900 373 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 NME5P56597 212 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 TYSND1Q2T9J0 566 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 RAB12Q6IQ22 244 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 SHQ1Q6PI26 577 aaKnown RBP-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 DPY19L4Q7Z388 723 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 CCDC89Q8N998 374 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 C15orf53Q8NAA6 179 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 C11orf72Q8NBR9 251 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 TMBIM1Q969X1 311 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 CNDP1Q96KN2 507 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 UBE2E2Q96LR5 201 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 TMEM243Q9BU79 118 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 GNG12Q9UBI6 72 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 CES1P1Q9UKY3 287 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 KCNIP3Q9Y2W7 256 aa-1.9□□□□□ -2.71
SNORA40.13-201ENST00000516379 CDHR2Q9BYE9 1310 aa-1.91□□□□□ -2.71
SNORA40.13-201ENST00000516379 POLQO75417 2590 aa-1.91□□□□□ -2.71
SNORA40.13-201ENST00000516379 IGKV1-27A0A075B6S5 117 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 TP53I11O14683 189 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 TAAR5O14804 337 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 GEMIN2O14893 280 aaKnown RBP-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 TRAPPC3O43617 180 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 DPM1O60762 260 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 SPINK1P00995 79 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 CXCL10P02778 98 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 HSPD1P10809 573 aaKnown RBP-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 F2RP25116 425 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 RPS15P62841 145 aaKnown RBP-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 ZNF33AQ06730 810 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 GK3PQ14409 553 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 KRTAP20-2Q3LI61 65 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 MLIPQ5VWP3 458 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 LRRC8AQ8IWT6 810 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 ZCCHC7Q8N3Z6 543 aaKnown RBP-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 LPCAT1Q8NF37 534 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 ZNRF2Q8NHG8 242 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 GIPC3Q8TF64 312 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 FXYD5Q96DB9 178 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 SLC35G5Q96KT7 338 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 OR8B4Q96RC9 309 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 GPR22Q99680 433 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 PRRT1Q99946 306 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 Q9BRP9 147 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 TUBGCP2Q9BSJ2 902 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 ECT2Q9H8V3 914 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 PRSS16Q9NQE7 514 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 SMOXQ9NWM0 555 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 TDRKHQ9Y2W6 561 aaKnown RBP-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 STAB2Q8WWQ8 2551 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 ZNF292O60281 2723 aa-1.91□□□□□ -2.72
SNORA40.13-201ENST00000516379 A0A1B0GVG6 124 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 F6UB75 175 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 SDHDO14521 159 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 CACNG3O60359 315 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 SMPD2O60906 423 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 SCN2BO60939 215 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 BCAS2O75934 225 aaPredicted RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 MMP11P24347 488 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 PEBP1P30086 187 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 KIF5BP33176 963 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 FDFT1P37268 417 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 YAP1P46937 504 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 QARSP47897 775 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 PLA2G16P53816 162 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 VSX2P58304 361 aaPredicted RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 CHIT1Q13231 466 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 NCF4Q15080 339 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 ELP2Q6IA86 826 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 TMPRSS11AQ6ZMR5 421 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 CENPUQ71F23 418 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 CLDN19Q8N6F1 224 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 CLDN23Q96B33 292 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 EFHD2Q96C19 240 aaPredicted RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 FAM103A1Q9BTL3 118 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 EDEM3Q9BZQ6 932 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 NHEJ1Q9H9Q4 299 aaPredicted RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 TMEM27Q9HBJ8 222 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 ANKEF1Q9NU02 776 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 STX18Q9P2W9 335 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 SLC7A8Q9UHI5 535 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 KCNE3Q9Y6H6 103 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 PTPRKQ15262 1439 aa-1.92□□□□□ -2.72
SNORA40.13-201ENST00000516379 NBEAL1Q6ZS30 2694 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 MYCBP2O75592 4640 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 DHX29Q7Z478 1369 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 IGHV1-69DA0A0B4J2H0 117 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 ISPDA4D126 451 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 IGKV1D-33P01593 117 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 IGKV1-33P01594 117 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 KITLGP21583 273 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 AKT2P31751 481 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 RBM34P42696 430 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 ENDOGQ14249 297 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 CLEC18BQ6UXF7 455 aa-1.93□□□□□ -2.72
SNORA40.13-201ENST00000516379 LRRC74BQ6ZQY2 392 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms