RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 HBE1P02100 147 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 GABRR1P24046 479 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 HRH1P35367 487 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 LONP1P36776 959 aaKnown RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 CFHR2P36980 270 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 NUP107P57740 925 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 STXBP1P61764 594 aaKnown RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 IFT88Q13099 833 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 DAZ2Q13117 558 aaKnown RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 CLINT1Q14677 625 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 FHL5Q5TD97 284 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 MLIPQ5VWP3 458 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 TMEM150AQ86TG1 271 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 INO80EQ8NBZ0 244 aaPredicted RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 PHOSPHO2Q8TCD6 241 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 DCUN1D4Q92564 292 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 C19orf60Q96EN9 201 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 SERPINB12Q96P63 405 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 UPF3BQ9BZI7 483 aaKnown RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 TMEM38AQ9H6F2 299 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 BEX1Q9HBH7 125 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 DAZ3Q9NR90 486 aaKnown RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 SAMSN1Q9NSI8 373 aaKnown RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 KCNE3Q9Y6H6 103 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 CNOT1A5YKK6 2376 aaKnown RBP3.6□□□□□ -1.83
RFC1-216ENST00000514572 FAM208BQ5VWN6 2430 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 PKD1L2Q7Z442 2459 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 MICAL3Q7RTP6 2002 aa3.6□□□□□ -1.83
RFC1-216ENST00000514572 DNAH14Q0VDD8 3507 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 SIP14410 1827 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 FASNP49327 2511 aaKnown RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 NDUFS8O00217 210 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 PEX7O00628 323 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 SLC9A3R1O14745 358 aaPredicted RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 TRAF3IP2O43734 574 aaPredicted RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 STAG3L2P0CL84 134 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 HTR1EP28566 365 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 CTRLP40313 264 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 CCNG1P51959 295 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 CCL23P55773 120 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 NUTF2P61970 127 aaKnown RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 DYNLL1P63167 89 aaKnown RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 HERPUD1Q15011 391 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 IL17AQ16552 155 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 TRMT5Q32P41 509 aaKnown RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 UBE2UQ5VVX9 321 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 LINC00336Q6ZUF6 198 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 LINC00173Q6ZV60 143 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 CSGALNACT2Q8N6G5 542 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 GATSQ8NAP1 163 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 OR5T3Q8NGG3 340 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 LINC01006Q8NI28 216 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 AURKBQ96GD4 344 aaPredicted RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 SLC35E1Q96K37 410 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 B3GALT6Q96L58 329 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 HAUS4Q9H6D7 363 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 RPS10P5Q9NQ39 176 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 MMP26Q9NRE1 261 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 CTPS2Q9NRF8 586 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 AGPAT4Q9NRZ5 378 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 ST3GAL6Q9Y274 331 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 YARS2Q9Y2Z4 477 aaKnown RBP3.59□□□□□ -1.83
RFC1-216ENST00000514572 Q9Y3F1 56 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 MYH7P12883 1935 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 SCN10AQ9Y5Y9 1956 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 RAD50Q92878 1312 aa3.59□□□□□ -1.83
RFC1-216ENST00000514572 CEP295Q9C0D2 2601 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 MYO10Q9HD67 2058 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 MAP1BP46821 2468 aaKnown RBP3.58□□□□□ -1.84
RFC1-216ENST00000514572 HIDE1A8MVS5 230 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 HDAC3O15379 428 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 NUPL2O15504 423 aaKnown RBP3.58□□□□□ -1.84
RFC1-216ENST00000514572 RNF113AO15541 343 aaKnown RBP3.58□□□□□ -1.84
RFC1-216ENST00000514572 NEMFO60524 1076 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 TNFSF13O75888 250 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 UBTFL6P0CB48 400 aaPredicted RBP3.58□□□□□ -1.84
RFC1-216ENST00000514572 SMIM10L1P0DMW3 83 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 NR2C1P13056 603 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 RAB4AP20338 218 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 CASQ1P31415 396 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 NCBP2P52298 156 aaKnown RBP eCLIP3.58□□□□□ -1.84
RFC1-216ENST00000514572 HADHBP55084 474 aaKnown RBP3.58□□□□□ -1.84
RFC1-216ENST00000514572 GNB2P62879 340 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 LCN2P80188 198 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 CDH17Q12864 832 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 GUCA2BQ16661 112 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 ZNF630Q2M218 657 aaPredicted RBP3.58□□□□□ -1.84
RFC1-216ENST00000514572 FBXO48Q5FWF7 155 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 GPR107Q5VW38 600 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 OTPQ5XKR4 325 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 SPINK14Q6IE38 97 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 ULK3Q6PHR2 472 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 C6orf89Q6UWU4 347 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 DEFB128Q7Z7B8 93 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 STPG2Q8N412 459 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 SUMF2Q8NBJ7 301 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 CD300LFQ8TDQ1 290 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 MARC2Q969Z3 335 aa3.58□□□□□ -1.84
RFC1-216ENST00000514572 ECHDC3Q96DC8 303 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms