RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 A0A1W2PPW3 197 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 H3BSH0 61 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 CELA3BP08861 270 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 SNAI3Q3KNW1 292 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 UNQ9370/PRO34162Q6UXP9 181 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 COMMD2Q86X83 199 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 FAM169BQ8N8A8 192 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 KCNS3Q9BQ31 491 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 DCSTAMPQ9H295 470 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 CRNNQ9UBG3 495 aaPredicted RBP17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 DHDHQ9UQ10 334 aa17.75■□□□□ 0.43
VCPKMT-203ENST00000484763 A0A1B0GVI7 797 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 SYT7O43581 403 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 ARL6IP5O75915 188 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 UCHL1P09936 223 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 SERPINB10P48595 397 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 PPA1Q15181 289 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 GFOD2Q3B7J2 385 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 MYPOPQ86VE0 399 aaPredicted RBP17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 ZNF843Q8N446 348 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 OR1J2Q8NGS2 313 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 LILRB4Q8NHJ6 448 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 DERL3Q96Q80 235 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 GPR84Q9NQS5 396 aa17.74■□□□□ 0.43
VCPKMT-203ENST00000484763 C5orf63A6NC05 138 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 FAM90A27PA6NNH2 459 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 IGLV1-44P01699 117 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 IGLV3-1P01715 115 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 CCL1P22362 96 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 CALRP27797 417 aaKnown RBP17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 MAGEB1P43366 347 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 SOX2P48431 317 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 TAB1Q15750 504 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 FBXL19-AS1Q494R0 122 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 FAM27D1Q5T7N8 215 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 COLCA1Q6ZS62 124 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 TMEM106AQ96A25 262 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 DCUN1D5Q9BTE7 237 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 C1QTNF6Q9BXI9 259 aa17.73■□□□□ 0.43
VCPKMT-203ENST00000484763 A0A1B0GTI1 187 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 CD2P06729 351 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 DOK3Q7L591 496 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 OR13C3Q8NGS6 347 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 CA5BP1Q8WTZ4 195 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 APOBEC3DQ96AK3 386 aaPredicted RBP17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 PPIL3Q9H2H8 161 aaKnown RBP17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 CDH20Q9HBT6 801 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 NOX4Q9NPH5 578 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 ZNF391Q9UJN7 358 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 A0A1W2PPK0 400 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 RAF1P04049 648 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 MYL9P24844 172 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 HSD17B12Q53GQ0 312 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 SSX8Q7RTT4 187 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 PAQR4Q8N4S7 273 aaPredicted RBP17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 RGCCQ9H4X1 137 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 HIVEP3Q5T1R4 2406 aa17.72■□□□□ 0.43
VCPKMT-203ENST00000484763 KMT2BQ9UMN6 2715 aaPredicted RBP17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 TRBV5-7A0A0A0MS05 114 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 XRCC2O43543 280 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 C1QL1O75973 258 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 CECR9P0C854 216 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 ZNF12P17014 697 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 PCSK6P29122 969 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 MTNR1BP49286 362 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 C3orf36Q3SXR2 165 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 LRRC46Q96FV0 321 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 REEP6Q96HR9 211 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 FAM71F1Q96KD3 344 aaPredicted RBP17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 LYZL4Q96KX0 146 aa17.71■□□□□ 0.43
VCPKMT-203ENST00000484763 IGHV1-18A0A0C4DH31 117 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 PIN1P1O15428 100 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 CDRT1O95170 752 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 IL1AP01583 271 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 ZNF182P17025 639 aaPredicted RBP17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 SDC2P34741 201 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 WNT5AP41221 380 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 GLYATL3Q5SZD4 288 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 PLPP7Q8NBV4 271 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 CCDC54Q8NEL0 328 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 OR2AE1Q8NHA4 323 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 DYNC2LI1Q8TCX1 351 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 SGK3Q96BR1 496 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 MED18Q9BUE0 208 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 PTTG2Q9NZH5 202 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 DIDO1Q9BTC0 2240 aaKnown RBP17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 RELNP78509 3460 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 J3QW42 95 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 ICMTO60725 284 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 PPP3CBP16298 524 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 AKAP1Q92667 903 aaKnown RBP eCLIP17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 RNASE6Q93091 150 aaKnown RBP17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 SOX7Q9BT81 388 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 ZNF275Q9NSD4 429 aaPredicted RBP17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 TBCCD1Q9NVR7 557 aa17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 EIF3KQ9UBQ5 218 aaKnown RBP17.7■□□□□ 0.42
VCPKMT-203ENST00000484763 TRAV1-2A0A0B4J238 106 aa17.69■□□□□ 0.42
VCPKMT-203ENST00000484763 SHISA3A0PJX4 238 aa17.69■□□□□ 0.42
VCPKMT-203ENST00000484763 NKX2-6A6NCS4 301 aa17.69■□□□□ 0.42
VCPKMT-203ENST00000484763 CASKO14936 926 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms