RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PCDH11XQ9BZA7 1347 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 FHOD3Q2V2M9 1422 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 TRBV9A0A0B4J1U6 114 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 IGHV1-69DA0A0B4J2H0 117 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 TRBV11-1A0A0K0K1C0 115 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 OR2AG2A6NM03 316 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 NDUFAB1O14561 156 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 KLHL2O95198 593 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 CYB5R3P00387 301 aaPredicted RBP1.18□□□□□ -2.22
RBM39-228ENST00000471635 OR1E1P30953 314 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 BMI1P35226 326 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 PRLHRP49683 370 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 GZMMP51124 257 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 RAB10P61026 200 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 CYP24A1Q07973 514 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 SIGLEC14Q08ET2 396 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 FAM53BQ14153 422 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 TRAM2Q15035 370 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 NCF4Q15080 339 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 PGGHGQ32M88 737 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 DEFB134Q4QY38 66 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 HSP90AB3PQ58FF7 597 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 STUMQ69YW2 141 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 H3F3CQ6NXT2 135 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 CBR4Q8N4T8 237 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 CSGALNACT2Q8N6G5 542 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 ZNF645Q8N7E2 425 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 OR5T1Q8NG75 326 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 OR4M1Q8NGD0 313 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 OR10G6Q8NH81 332 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 RAB3IL1Q8TBN0 382 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 RASD2Q96D21 266 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 C18orf15Q96N68 181 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 TMEM165Q9HC07 324 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 RETNQ9HD89 108 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 MED4Q9NPJ6 270 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 PITPNC1Q9UKF7 332 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 COMMD3-BMI1R4GMX3 469 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 MYO9BQ13459 2157 aa1.18□□□□□ -2.22
RBM39-228ENST00000471635 IGKV1-27A0A075B6S5 117 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 IGHV3-49A0A0A0MS15 119 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 SMCO3A2RU48 225 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 GOLGA8OA6NCC3 632 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 PDZK1P1A8MUH7 402 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 GOLGA8NF8WBI6 632 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 TNFRSF11BO00300 401 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 NMT2O60551 498 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 EIF1BO60739 113 aaKnown RBP1.17□□□□□ -2.22
RBM39-228ENST00000471635 PAHP00439 452 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 LHBP01229 141 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 FTH1P02794 183 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 TROVE2P10155 538 aaKnown RBP eCLIP1.17□□□□□ -2.22
RBM39-228ENST00000471635 CSNK2A2P19784 350 aaPredicted RBP1.17□□□□□ -2.22
RBM39-228ENST00000471635 IL32P24001 234 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 RRM2P31350 389 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 EIF1P41567 113 aaKnown RBP1.17□□□□□ -2.22
RBM39-228ENST00000471635 PSMD5Q16401 504 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 ALKBH6Q3KRA9 238 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 YIF1BQ5BJH7 314 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 C16orf47Q6ZP98 133 aaPredicted RBP1.17□□□□□ -2.22
RBM39-228ENST00000471635 TAS2R42Q7RTR8 314 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 OR5K2Q8NHB8 316 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 LYPD6BQ8NI32 183 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 OR51E1Q8TCB6 317 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 SLC38A4Q969I6 547 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 NRBF2Q96F24 287 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 ZFP3Q96NJ6 502 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 TMEM243Q9BU79 118 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 SLIRPQ9GZT3 109 aaKnown RBP1.17□□□□□ -2.22
RBM39-228ENST00000471635 ZNF442Q9H7R0 627 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 NEK6Q9HC98 313 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 MYOZ1Q9NP98 299 aaPredicted RBP1.17□□□□□ -2.22
RBM39-228ENST00000471635 RHBDL2Q9NX52 303 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 HPCAL4Q9UM19 191 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 NACADO15069 1562 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 LOXHD1Q8IVV2 1947 aa1.17□□□□□ -2.22
RBM39-228ENST00000471635 SYNJ2BP-COX16A0A087WUM0 186 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 IGHV1-3A0A0C4DH29 117 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 C9JVG2 144 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 SLC9A3R1O14745 358 aaPredicted RBP1.16□□□□□ -2.22
RBM39-228ENST00000471635 CDC40O60508 579 aaKnown RBP eCLIP1.16□□□□□ -2.22
RBM39-228ENST00000471635 PLIN3O60664 434 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 SERPINB7O75635 380 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 CNMDO75829 334 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 CD160O95971 181 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 NTF3P20783 257 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 BCKDHBP21953 392 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 PSMB5P28074 263 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 CD70P32970 193 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 SYKP43405 635 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 NDUFA8P51970 172 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 CMC4P56277 68 aaPredicted RBP1.16□□□□□ -2.22
RBM39-228ENST00000471635 ZNF121P58317 390 aaPredicted RBP1.16□□□□□ -2.22
RBM39-228ENST00000471635 TAS2R46P59540 309 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 LIPEQ05469 1076 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 PPIDQ08752 370 aaKnown RBP1.16□□□□□ -2.22
RBM39-228ENST00000471635 PNOCQ13519 176 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 GCSAMLQ5JQS6 135 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 TPTE2P1Q5T6R2 138 aa1.16□□□□□ -2.22
RBM39-228ENST00000471635 LRRC66Q68CR7 880 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms