RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SBK2P0C263 348 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 HNF1AP20823 631 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 S100PP25815 95 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 FLI1Q01543 452 aaPredicted RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 EMX1Q04741 257 aaPredicted RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 MRPL49Q13405 166 aaKnown RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 PMS2P11Q13670 270 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 KCNMB1Q16558 191 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 HIKESHIQ53FT3 197 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 OR2G6Q5TZ20 316 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 SLC25A47Q6Q0C1 308 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 PLEKHG7Q6ZR37 379 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 LINC00346Q8IVM7 164 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 C20orf196Q8IYI0 205 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 ZNF596Q8TC21 504 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 MITD1Q8WV92 249 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 TMEM54Q969K7 222 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 RBP7Q96R05 134 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 SIGLEC11Q96RL6 698 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 SLC5A7Q9GZV3 580 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 BCO1Q9HAY6 547 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 CHMP1AQ9HD42 196 aaPredicted RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 MYOZ1Q9NP98 299 aaPredicted RBP9.07□□□□□ -0.96
USP39-210ENST00000459775 UGT2A1Q9Y4X1 527 aa9.07□□□□□ -0.96
USP39-210ENST00000459775 GTF3C1Q12789 2109 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 NPIPB13A6NJU9 1138 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 SLC22A31A6NKX4 558 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 NPIPB4C9JG80 1138 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 J3QRE1 110 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 RGS10O43665 173 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 CTXN2P0C2S0 81 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 PATE4P0C8F1 98 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 RAB3AP20336 220 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 CD40LGP29965 261 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 KIR2DL2P43627 348 aaPredicted RBP9.06□□□□□ -0.96
USP39-210ENST00000459775 TEKQ02763 1124 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 ALKBH1Q13686 389 aaKnown RBP9.06□□□□□ -0.96
USP39-210ENST00000459775 RNPS1Q15287 305 aaKnown RBP9.06□□□□□ -0.96
USP39-210ENST00000459775 IGFBP7Q16270 282 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 ZMAT1Q5H9K5 638 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 NSUN5P2Q63ZY6 315 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 ZNF773Q6PK81 442 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 DCDC5Q6ZRR9 648 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 KCTD8Q6ZWB6 473 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 DPY19L4Q7Z388 723 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 UBE2J2Q8N2K1 259 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 LRRC18Q8N456 261 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 CHPT1Q8WUD6 406 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 C11orf40Q8WZ69 217 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 OR5M11Q96RB7 305 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 ZNF649Q9BS31 505 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 ULBP2Q9BZM5 246 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 FKBP7Q9Y680 259 aa9.06□□□□□ -0.96
USP39-210ENST00000459775 A0A1W2PQL4 384 aaPredicted RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 ZNF593O00488 134 aaPredicted RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 SLC43A1O75387 559 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 ATE1O95260 518 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 TFAP2AP05549 437 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 LIMS3P0CW19 117 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 LIMS4P0CW20 117 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 OR3A3P47888 321 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 CEBPDP49716 269 aaPredicted RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 ENTPD1P49961 510 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 RAB13P51153 203 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 PRSS12P56730 875 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 PMPCAQ10713 525 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 CEACAM16Q2WEN9 425 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 XAF1Q6GPH4 301 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 HDDC2Q7Z4H3 204 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 ZNF100Q8IYN0 542 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 GPR137CQ8N3F9 429 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 SLC26A10Q8NG04 563 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 OR6N2Q8NGY6 317 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 NANPQ8TBE9 248 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 WNT2BQ93097 391 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 YTHDF1Q9BYJ9 559 aaKnown RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 ISG20L2Q9H9L3 353 aaKnown RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 KCNG2Q9UJ96 466 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 PCDHGB1Q9Y5G3 927 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 PHF3Q92576 2039 aaKnown RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 FREM1Q5H8C1 2179 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 A0A096LPE4 126 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 A0A1W2PPZ6 126 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 ZNF724A8MTY0 619 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 KHDRBS3O75525 346 aaKnown RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 KRT33AO76009 404 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 SPARCP09486 303 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 GLI4P10075 376 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 B4GALT1P15291 398 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 PCMT1P22061 227 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 PER3P56645 1201 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 ZNF85Q03923 595 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 MAB21L1Q13394 359 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 TRIM16LQ309B1 348 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 SSC4DQ8WTU2 575 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 APH1AQ96BI3 265 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 CNN2Q99439 309 aaKnown RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 TTYH2Q9BSA4 534 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 SLCO5A1Q9H2Y9 848 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms