RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 BDKRB2P30411 391 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 GUCA1AP43080 201 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 FOXG1P55316 489 aaPredicted RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 SNAI3Q3KNW1 292 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 DNM1P34Q6PK57 102 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 BEST3Q8N1M1 668 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF680Q8NEM1 530 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 COQ8AQ8NI60 647 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 MRPL13Q9BYD1 178 aaKnown RBP10.53□□□□□ -0.72
PTPRN-204ENST00000423636 EXPH5Q8NEV8 1989 aa10.53□□□□□ -0.72
PTPRN-204ENST00000423636 FAM230AA0A1W2PPH8 454 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 A6NIZ1 184 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 CYB5AP00167 134 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 SULT1A3P0DMM9 295 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 SULT1A4P0DMN0 295 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 CSNK1A1P48729 337 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 RAP1BP61224 184 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 RAP1AP62834 184 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 SRSF6Q13247 344 aaKnown RBP10.52□□□□□ -0.73
PTPRN-204ENST00000423636 RAB11FIP2Q7L804 512 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 OR1M1Q8NGA1 313 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 MFRPQ9BY79 579 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 TMPRSS13Q9BYE2 586 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 C12orf10Q9HB07 376 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 PADI1Q9ULC6 663 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 C13orf42A0A1B0GVH6 325 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 A0A1W2PNU3 283 aaPredicted RBP10.52□□□□□ -0.73
PTPRN-204ENST00000423636 STMND1H3BQB6 276 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 SRSF10O75494 262 aaKnown RBP10.52□□□□□ -0.73
PTPRN-204ENST00000423636 TRAPPC2P0DI81 140 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 TRAPPC2BP0DI82 140 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 GABRR1P24046 479 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 GDF1P27539 372 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 DLSTP36957 453 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 MPLP40238 635 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 ARHGDIBP52566 201 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 ZXDAP98168 799 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 DYRK1AQ13627 763 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 EXOSC2Q13868 293 aaKnown RBP10.52□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF774Q6NX45 483 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 ADAD2Q8NCV1 583 aaKnown RBP10.52□□□□□ -0.73
PTPRN-204ENST00000423636 CT55Q8WUE5 264 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 CCDC120Q96HB5 630 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 THOC3Q96J01 351 aaKnown RBP10.52□□□□□ -0.73
PTPRN-204ENST00000423636 IMMP1LQ96LU5 166 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 GPR173Q9NS66 373 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 IL17BQ9UHF5 180 aa10.52□□□□□ -0.73
PTPRN-204ENST00000423636 CCDC187A0A096LP49 1063 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF736B4DX44 427 aaPredicted RBP10.51□□□□□ -0.73
PTPRN-204ENST00000423636 EEF1E1-BLOC1S5C9J1V9 151 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 GSTZ1O43708 216 aaPredicted RBP10.51□□□□□ -0.73
PTPRN-204ENST00000423636 SPDEFO95238 335 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF250P15622 560 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 PTGS2P35354 604 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 RGS19P49795 217 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 NPY4RP50391 375 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ALKBH2Q6NS38 261 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 GLDNQ6ZMI3 551 aaPredicted RBP10.51□□□□□ -0.73
PTPRN-204ENST00000423636 RELL2Q8NC24 303 aaPredicted RBP10.51□□□□□ -0.73
PTPRN-204ENST00000423636 TTC9Q92623 222 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 CCNL2Q96S94 520 aaPredicted RBP10.51□□□□□ -0.73
PTPRN-204ENST00000423636 PIPOXQ9P0Z9 390 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 KCNK7Q9Y2U2 307 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 A0A0A6YYD4 124 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 A0A1B0GTI1 187 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 PHYHO14832 338 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 SLC22A5O76082 557 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 NDUFB6O95139 128 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF17P17021 662 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 AP3S2P59780 193 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 FAM74A1Q5RGS3 127 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 CD276Q5ZPR3 534 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 TMPRSS7Q7RTY8 843 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 BHLHE23Q8NDY6 225 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 OR2Y1Q8NGV0 311 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 SFXN2Q96NB2 322 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ULBP2Q9BZM5 246 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 GLTPQ9NZD2 209 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 NOP16Q9Y3C1 178 aaKnown RBP10.51□□□□□ -0.73
PTPRN-204ENST00000423636 MEIKINA0A087WXM9 373 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 RAF1P04049 648 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 PER3P56645 1201 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF813Q6ZN06 617 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ADGRE4PQ86SQ3 457 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 CDH24Q86UP0 819 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ZNF584Q8IVC4 421 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 MISPQ8IVT2 679 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 FBXO17Q96EF6 278 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 SLA2Q9H6Q3 261 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 P4HTMQ9NXG6 502 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 TCFL5Q9UL49 500 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 ZZEF1O43149 2961 aa10.51□□□□□ -0.73
PTPRN-204ENST00000423636 IGKV1-9A0A0C4DH69 117 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 A0A1W2PR80 420 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ECDO95905 644 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-204ENST00000423636 IGF2P01344 180 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 AKAIN1P0CW23 69 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 LIFP15018 202 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 RAB3AP20336 220 aa10.5□□□□□ -0.73
PTPRN-204ENST00000423636 ITGA3P26006 1051 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms